PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99100.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family TCP
Protein Properties Length: 377aa    MW: 42488.1 Da    PI: 6.378
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP998.6e-31107199689
         TCP   6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.........k 89 
                   h k++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+i+WL+++ak+ai +l +++ +++++ ++++s+++++++ s+         +
  PON99100.1 107 LAHNKVSTSRGPRDRRVRLSAPTAIEFYDVQDRLGYDQPSKAIDWLIEKAKAAIEALKELPGENQESIDTNNSVKQTEQEVSEericqlqhcQ 199
                 569*********************************************************555554444444444444333323333443331 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MLQQRELKHG KKDRQDRDEQ VEEHVKVPFC SKTYDHLDQA ESGRNRCHSQ ELASNKRAVK  60
YERFGKSNKL VSEQPTSKLR RENSEGHAVQ VQGGHVVRLI GQKRRSLAHN KVSTSRGPRD  120
RRVRLSAPTA IEFYDVQDRL GYDQPSKAID WLIEKAKAAI EALKELPGEN QESIDTNNSV  180
KQTEQEVSEE RICQLQHCQG CSMENQLRLN ETTTSNGSIF SMAAGTPSYS SQFLDYLTEK  240
NLQTYKAPDF DLRHSSPIDF AEEQLNSDTI LSDLNSADTD RFQSLMALNS FAGNGGEELV  300
SNSLPALLQE PLLSENQFLS QWGPLQSSNL LSVHASTNPP ICVNGHANAQ SPNSHLFPLK  360
DFPQVDLLGF NFQCQYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.11e-20TCP family protein