PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98959.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 502aa MW: 56825.4 Da PI: 6.8505

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	306	349	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR ri +++ +Lr+l+Pk +Kl+K ++L A++YIk+Lq PON98959.1 306 HTERNRRFRIQNGILTLRSLVPKI-----TKLDKTSTLVDAINYIKELQ 349 57*******************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MRLREVEWFR PLIGAQQWDY VVVWKLGDEP SRFIEWMGCC CRGSIDCGNV KEEKSEENHL 60 NPLCRDDYMK HPVRTKACKE LTQLPTYMPL YSGVHHIEVL LSSQPRWLSQ VDSSDSKPSH 120 DDSGGTRVLV PVEGGLIELY CTKHIAKEPK VLELVLAHCN ISLEKETMAK NICSNERPNK 180 GLHLDALTEQ WPFSSHLLSS SPSLQALCAV AQSSSHTSIE GSSRTGSSNP PNEHMLFDSS 240 CVYESQSELF EQSIEKCSSS HKLDCNGNFL AQLAQQEGSV RGHEAEKSAT KTIRKKGEEC 300 HSKNLHTERN RRFRIQNGIL TLRSLVPKIT KLDKTSTLVD AINYIKELQK EEKELQDELK 360 KMEEEDYCHK NKNEYTITKP NKSKEVAERL LSAEQNQSSS TFGTKQQILT HVEVNQIGKR 420 EFFIKLLRQQ NQGGFVRLME ALDSLELQVL SANLTTFNGI VQNILEVKAE KDIQPEKLRS 480 ALIELTGSIN QRVSIESMKG GS

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MRLREVEWFR PLIGAQQWDY VVVWKLGDEP SRFIEWMGCC CRGSIDCGNV KEEKSEENHL  60
NPLCRDDYMK HPVRTKACKE LTQLPTYMPL YSGVHHIEVL LSSQPRWLSQ VDSSDSKPSH  120
DDSGGTRVLV PVEGGLIELY CTKHIAKEPK VLELVLAHCN ISLEKETMAK NICSNERPNK  180
GLHLDALTEQ WPFSSHLLSS SPSLQALCAV AQSSSHTSIE GSSRTGSSNP PNEHMLFDSS  240
CVYESQSELF EQSIEKCSSS HKLDCNGNFL AQLAQQEGSV RGHEAEKSAT KTIRKKGEEC  300
HSKNLHTERN RRFRIQNGIL TLRSLVPKIT KLDKTSTLVD AINYIKELQK EEKELQDELK  360
KMEEEDYCHK NKNEYTITKP NKSKEVAERL LSAEQNQSSS TFGTKQQILT HVEVNQIGKR  420
EFFIKLLRQQ NQGGFVRLME ALDSLELQVL SANLTTFNGI VQNILEVKAE KDIQPEKLRS  480
ALIELTGSIN QRVSIESMKG GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	8e-39	bHLH family protein