PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98850.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 356aa MW: 39723.1 Da PI: 8.334

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl PON98850.1 31 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 85 79****************************************************8 PP
2	Myb_DNA-binding	72.6	6.2e-23	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ PON98850.1 33 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 84 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MFQHKKPSTM NSSHDRPMCV DSGLVLTTDP KPRLRWTVEL HERFVDAVTQ LGGPDKATPK 60 TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNDHSIKD ASALELQRNT ASSSAMISRS 120 MNDSNSHMVD AIRMQMEVQR RLHEQLEVQK HLQLRIEAQG KYMQSILEKA CQTLAGENMA 180 SGSYKGTIVN HQGVPHDMGT MKDFTSPLGF PSFQDLNIYG GEQLDLQQNL ERPSIDGFLQ 240 NNENLCLGKK RPSPYSGSGK SPLIWSDDLR LQDLGTAPSC LGAPDDPFKG DQMSERGTEI 300 DSLSDIYETK PVISGDMGDK KFEAAGGTKL ERPSPRRAPL TDRMSPMIQG RNSPYG

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MFQHKKPSTM NSSHDRPMCV DSGLVLTTDP KPRLRWTVEL HERFVDAVTQ LGGPDKATPK  60
TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNDHSIKD ASALELQRNT ASSSAMISRS  120
MNDSNSHMVD AIRMQMEVQR RLHEQLEVQK HLQLRIEAQG KYMQSILEKA CQTLAGENMA  180
SGSYKGTIVN HQGVPHDMGT MKDFTSPLGF PSFQDLNIYG GEQLDLQQNL ERPSIDGFLQ  240
NNENLCLGKK RPSPYSGSGK SPLIWSDDLR LQDLGTAPSC LGAPDDPFKG DQMSERGTEI  300
DSLSDIYETK PVISGDMGDK KFEAAGGTKL ERPSPRRAPL TDRMSPMIQG RNSPYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-129	G2-like family protein