PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98729.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 495aa MW: 53839 Da PI: 5.9494

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.9	4.7e-33	267	321	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHerFveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl PON98729.1 267 KPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKAMNVEGLTIYHVKSHLQKYRL 321 79****************************************************8 PP
2	Myb_DNA-binding	53.7	4.9e-17	269	320	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+av++l g t+k + + m+ +g+t +++ks++qky+ PON98729.1 269 RMRWTPELHERFVEAVNKLDGAekaTPKGVLKAMNvEGLTIYHVKSHLQKYR 320 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MNHHSIIFKP QGDPSKGVSD SYCTAVSLVH DFLSSGSEGR SLLAGECSSS RPSPFIRTES 60 IRSPTLMGAS SIHPPKYFFG SGSNTPMSLG SQVQHTKNPF SRSSVFCTSL YQSSSSSSET 120 HRQLGNLPFL PPPTCNQSIS AVDSTNSPLL FSADLGNQYD EDQSEGLMKD FLNLPGDASH 180 GSFHGLSCES DSLGLTDHLE LQYLSDELDI AITDHGEIPG VDELYETSQA SPKPSIGLTC 240 NQSYRSMAPS VDALLNHPSP CPATAHKPRM RWTPELHERF VEAVNKLDGA EKATPKGVLK 300 AMNVEGLTIY HVKSHLQKYR LAKYMPEKKE EKKASSPEEK KTASSSSEID GRRKGSIQIT 360 EALRMQMEVQ KQLHEQLEVQ RALQLRIEEH ARYLQKILEE QQKAGGALVS SQALSSVTTP 420 GCEDSEQPSS PCAVGSSPQL TESKADSSSS SLPMKLKAIE SNSDCGPKES NKRIRLTEKA 480 EIAGDDEAVV QNAQE

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MNHHSIIFKP QGDPSKGVSD SYCTAVSLVH DFLSSGSEGR SLLAGECSSS RPSPFIRTES  60
IRSPTLMGAS SIHPPKYFFG SGSNTPMSLG SQVQHTKNPF SRSSVFCTSL YQSSSSSSET  120
HRQLGNLPFL PPPTCNQSIS AVDSTNSPLL FSADLGNQYD EDQSEGLMKD FLNLPGDASH  180
GSFHGLSCES DSLGLTDHLE LQYLSDELDI AITDHGEIPG VDELYETSQA SPKPSIGLTC  240
NQSYRSMAPS VDALLNHPSP CPATAHKPRM RWTPELHERF VEAVNKLDGA EKATPKGVLK  300
AMNVEGLTIY HVKSHLQKYR LAKYMPEKKE EKKASSPEEK KTASSSSEID GRRKGSIQIT  360
EALRMQMEVQ KQLHEQLEVQ RALQLRIEEH ARYLQKILEE QQKAGGALVS SQALSSVTTP  420
GCEDSEQPSS PCAVGSSPQL TESKADSSSS SLPMKLKAIE SNSDCGPKES NKRIRLTEKA  480
EIAGDDEAVV QNAQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-118	G2-like family protein