PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON98705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 220aa MW: 24399.2 Da PI: 6.5991 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16 | 3.4e-05 | 38 | 60 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F++ L H++ H PON98705.1 38 YECTYCKRGFTNAQALGGHMNIH 60 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MESEKQGLSS ENSSSSEEND HRSEGQVVNE SGGAKRSYEC TYCKRGFTNA QALGGHMNIH 60 RKDRAKAKQH SSASHIHSHH HHELAEIAVA ASPFTTPFPS QSTAAWSMYQ PPSSVAETHQ 120 RNYNNMYFHQ PSAYGGTNFG NSSTYYGSDY CNHEFGSRSS SVTDHSLTMN EELLGANLSL 180 RMSSTSSSHL DDYEARRGSL MRHNSTDEVD LELRLGHGHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53820.1 | 3e-15 | C2H2 family protein |