PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON98293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34389.9 Da PI: 8.5634 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ed++l ++k +G g+W ++ g++R++k+c++rw +yl PON98293.1 14 RGAWTNLEDKILTAYIKVHGEGDWYNLPKLAGLNRCGKSCRLRWVNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E++l+++ +k+lG++ W+ Ia +++ gRt++++k++w++ PON98293.1 67 RGSISQDEEDLIIKMHKLLGNR-WSIIAGRLP-GRTDNEIKNYWNTT 111 78889*****************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGRRPCCSKL GLNRGAWTNL EDKILTAYIK VHGEGDWYNL PKLAGLNRCG KSCRLRWVNY 60 LRPDIKRGSI SQDEEDLIIK MHKLLGNRWS IIAGRLPGRT DNEIKNYWNT TLRKKLSEAP 120 NRNNDSINPK TKRKRSIPAL EPNNKVNNSN TKNIVKSHTV EPIKTKAFRF TSRVQKLPAL 180 FQFPTPCTDK WGQFSEKEFI LNHGSTMDKD QTSQESGDLI IDSCYCKGQQ INEDLMIKAP 240 STTTHDANSP SLDDHDQHVS ENNWIMASSN IINNDHFSNI GDELGELDFK SLECFLDLDK 300 E |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 135 | RKKLSEAPNRNNDSINPKTKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 8e-60 | MYB family protein |