PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON98073.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 285aa    MW: 31654.3 Da    PI: 9.1744
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON98073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-183483255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +g+WvAeI+d      k+ r +lg+f+taeeAa+a+++a+  l+g
  PON98073.1 34 KFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFDTAEEAAQAYDEAACLLRG 83
                799******.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MQLQAQKMQH KGVSANKQSK FKGRANTNDI SKNKFVGVRQ RPSGKWVAEI KDTTKKIRMW  60
LGTFDTAEEA AQAYDEAACL LRGSNTRTNF ASRVPTNSQL SLKIRNLLNH KKSSTQSNPA  120
TPAIRASTRI SPSCGISSNA TKDCFHYNTN QTFNSNTNYA SLSGFRNQNN PVFDGVYKPD  180
MSNCIVEPHP GMAPFDYTWP FSIGFDQFPI SQQGMELTKA IDSSSSSSCT TAELDFTEFG  240
RMKLERQISA SLYAMNGVNE HMGNAYDGGD AHWDLSAFYQ LFCPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-54ERF family protein