PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON98068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 366aa MW: 40504.5 Da PI: 7.035 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 8.1e-16 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l++ +++ G g+W+t +++ g+ R++k+c++rw +yl PON98068.1 34 RGPWTAEEDEVLARFIRKEGEGRWRTLPKRAGLMRCGKSCRLRWMNYL 81 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.5e-15 | 92 | 132 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l PON98068.1 92 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 132 89***************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MRKQPPSSSK TSNISSATGG SKTTPCCSKV GIKRGPWTAE EDEVLARFIR KEGEGRWRTL 60 PKRAGLMRCG KSCRLRWMNY LRPSVKRGHI APDEEDLILR LHRLLGNRWS LIAGRIPGRT 120 DNEIKNYWNT HLSKKLISQG IDPRTHKPLN PVDDHHKEIT NKASPSSSSK TNPHGRLSSN 180 PSPSPNRTYQ TPLSTVPEEG EEEEEEAPST EAAATQTNKE NGYFDFGQYN QSKGKVGYNF 240 HGYENFTGYN SVGYGTGLRS SSSTATTTNY GMGNEEDHDH AHEDINYCSD DVFSSFLNSL 300 INEDAFSGPQ HQLLPANGIN PPFSTTITGH DPAFLSTNGW ESAPMSSAAL NQNENPTRVD 360 HDGVLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-82 | MYB family protein |