PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97833.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HB-other

Protein Properties

Length: 1723aa MW: 193721 Da PI: 5.0888

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.5	2.3e-18	21	77	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+ ++ ++yps++ r+eL+ klgL++rq ++WF+ rR k++k PON97833.1 21 KTKRKMKTASQLEILEKTYAAESYPSESLRAELSVKLGLSDRQLQMWFCHRRLKDRK 77 6799***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1723 aa Download sequence
MEVSGSEGGE MKKKPPEGEN KTKRKMKTAS QLEILEKTYA AESYPSESLR AELSVKLGLS 60 DRQLQMWFCH RRLKDRKATP VQRQQRRDSP AGRGEEMAVG ELGNEHASGS GSGQIPFGHG 120 IESRQVVPRH WVAGSRTGAG GDMKVMMKRY YESQQTIAEL RAIAFVEAQL GEQLREDGPI 180 LGMEFDTLPP DAFGAPIAMA GQRKQSGRSF DAKYDHSETK SIKGTGRALQ EYQFIPEKPT 240 VRTEAYERLA PPSYHYGSPA DGPNARTSLL STGHAYLHGN EYLSSGYGFQ ASEKRATNEE 300 DVLLIGRKRK SEEARVARDI EAHEKRIRKE LEKQDILRRK REEQMRKEME RHDRERRKEE 360 ERLLREKQRE EERYQREQRR ELERREKFLQ KESIRAEKMR QKEELRREKE AARLRAANER 420 AIARKIAKES MELIEDERLE LMELAASSKG LSSILSLDYE TLQNLELYRV VYNDLSVGLS 480 SSCNIMYLPV TVISCHLYIR AWKVWRFLIT FADVLGLWPF TLDEFIQAFH DYDPRLLGEI 540 HVSLLKSVIK DIEDVARTPS TGLGANQTSA ANPGGGHPLI VEGAYAWGFD IRSWQRHLNP 600 LTWPEILRQF SLSAGFGPQL KKRNVEPSYL RDDNEGNDGA DIVSNLRSGA AVENAFAKMQ 660 ERGFSNPRRS RHRLTPGTVK FAAFHVLSLE GDKGLTILEV ADRIQKSGLR DLTTSKTPEA 720 SIAAALSRDT KLFERTAPST YCVRAAYRKD QADAEAILSA ARERIRFFKN GFLDGEDADD 780 GERDEDSESD VAEDPDIDDL GTEINPEKET PGCQEVSQLS AVSLLGNGNE SVQVIETPKK 840 DLQNIGGGLS AIQSESYVKM KDADSSLPQS IDVVGVYNDA SNYDDIDPDI DESNPGEPWV 900 QGLMEGEYSD LSVEERLNAL VALIGVAIEG NSIRHVLEER LEAANALKKQ MWAEVQLDKR 960 RMKEDFVMRT PYTSFTGNKF ELNPAISSAE GRQSPFVRVD VKSNETKVDL AVQEERISDP 1020 PNENPCVSSF PSEGNLQMQE VCAGPDNHLF QQPGYAADRS RSQLKSYIGH KAEEMYVYRS 1080 LPLGQDRARN RYWQFITSAS QNDPGCGRIF VELHDGHWRL IESEEGFDAL LASLDVRGVR 1140 ESQLHTMLLK IEISFKKAVR KTMLHPNMGR QSEDTAKTAA VELTPHADCS GSTDSPSSTL 1200 CVADSDMSES STFVIELGRN ENEKNGAFKR YQDLERWIWK ECFSSSMLFA TKHGKKRCNQ 1260 LLDVCDSCHG IYSSEDNHCP SCHRTFTTSE SGTSFAEHVT RCEEKLNLNR HWTLHGSDAF 1320 PLRIRLLKVV LALIEVSLPS EALQLLWTDS HRTSWGTKLK ASSSAEDLLQ VLTLLESAIK 1380 REHLFSEFET TDELLDSWSP RRYNATSSMR LETITVLPWV PLTTAAVALR VMEFDAAIFY 1440 VLQQKLESQK DRGSGNVIKL SSKYAFMKHS LDDGLTGTTC QADNRNEDSW ADLGDGLANS 1500 DHRKGGRGRA RGRSRTRGGR PQRSAIGSRG ESAKQNDGTL GHGLGWKGRG QGCKRGRRTI 1560 RSRQRPAKRM FEIRIVESTP EENIGDKSPR ILVQDWNAED ATGFQLEDAE PASSSGRSEY 1620 DEENGQGSGD EYDDMAMDDY ASGFNGRPGD LDGSDYNGIE DEVGDDNDDD EEEYDMRHDE 1680 QGDFDVDRYI NGDSNEEENG GGEEEENMVL DEPVGSTSSD YSD

Sequence ? help Back to Top

Protein Sequence Length: 1723 aa Download sequence

MEVSGSEGGE MKKKPPEGEN KTKRKMKTAS QLEILEKTYA AESYPSESLR AELSVKLGLS  60
DRQLQMWFCH RRLKDRKATP VQRQQRRDSP AGRGEEMAVG ELGNEHASGS GSGQIPFGHG  120
IESRQVVPRH WVAGSRTGAG GDMKVMMKRY YESQQTIAEL RAIAFVEAQL GEQLREDGPI  180
LGMEFDTLPP DAFGAPIAMA GQRKQSGRSF DAKYDHSETK SIKGTGRALQ EYQFIPEKPT  240
VRTEAYERLA PPSYHYGSPA DGPNARTSLL STGHAYLHGN EYLSSGYGFQ ASEKRATNEE  300
DVLLIGRKRK SEEARVARDI EAHEKRIRKE LEKQDILRRK REEQMRKEME RHDRERRKEE  360
ERLLREKQRE EERYQREQRR ELERREKFLQ KESIRAEKMR QKEELRREKE AARLRAANER  420
AIARKIAKES MELIEDERLE LMELAASSKG LSSILSLDYE TLQNLELYRV VYNDLSVGLS  480
SSCNIMYLPV TVISCHLYIR AWKVWRFLIT FADVLGLWPF TLDEFIQAFH DYDPRLLGEI  540
HVSLLKSVIK DIEDVARTPS TGLGANQTSA ANPGGGHPLI VEGAYAWGFD IRSWQRHLNP  600
LTWPEILRQF SLSAGFGPQL KKRNVEPSYL RDDNEGNDGA DIVSNLRSGA AVENAFAKMQ  660
ERGFSNPRRS RHRLTPGTVK FAAFHVLSLE GDKGLTILEV ADRIQKSGLR DLTTSKTPEA  720
SIAAALSRDT KLFERTAPST YCVRAAYRKD QADAEAILSA ARERIRFFKN GFLDGEDADD  780
GERDEDSESD VAEDPDIDDL GTEINPEKET PGCQEVSQLS AVSLLGNGNE SVQVIETPKK  840
DLQNIGGGLS AIQSESYVKM KDADSSLPQS IDVVGVYNDA SNYDDIDPDI DESNPGEPWV  900
QGLMEGEYSD LSVEERLNAL VALIGVAIEG NSIRHVLEER LEAANALKKQ MWAEVQLDKR  960
RMKEDFVMRT PYTSFTGNKF ELNPAISSAE GRQSPFVRVD VKSNETKVDL AVQEERISDP  1020
PNENPCVSSF PSEGNLQMQE VCAGPDNHLF QQPGYAADRS RSQLKSYIGH KAEEMYVYRS  1080
LPLGQDRARN RYWQFITSAS QNDPGCGRIF VELHDGHWRL IESEEGFDAL LASLDVRGVR  1140
ESQLHTMLLK IEISFKKAVR KTMLHPNMGR QSEDTAKTAA VELTPHADCS GSTDSPSSTL  1200
CVADSDMSES STFVIELGRN ENEKNGAFKR YQDLERWIWK ECFSSSMLFA TKHGKKRCNQ  1260
LLDVCDSCHG IYSSEDNHCP SCHRTFTTSE SGTSFAEHVT RCEEKLNLNR HWTLHGSDAF  1320
PLRIRLLKVV LALIEVSLPS EALQLLWTDS HRTSWGTKLK ASSSAEDLLQ VLTLLESAIK  1380
REHLFSEFET TDELLDSWSP RRYNATSSMR LETITVLPWV PLTTAAVALR VMEFDAAIFY  1440
VLQQKLESQK DRGSGNVIKL SSKYAFMKHS LDDGLTGTTC QADNRNEDSW ADLGDGLANS  1500
DHRKGGRGRA RGRSRTRGGR PQRSAIGSRG ESAKQNDGTL GHGLGWKGRG QGCKRGRRTI  1560
RSRQRPAKRM FEIRIVESTP EENIGDKSPR ILVQDWNAED ATGFQLEDAE PASSSGRSEY  1620
DEENGQGSGD EYDDMAMDDY ASGFNGRPGD LDGSDYNGIE DEVGDDNDDD EEEYDMRHDE  1680
QGDFDVDRYI NGDSNEEENG GGEEEENMVL DEPVGSTSSD YSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1507	1517	RGRARGRSRTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein