PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97805.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 746aa MW: 82731.2 Da PI: 6.9918

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.8	8.6e-09	475	512	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + PON97805.1 475 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 512 554459******************************88 PP
2	BELL	120.4	7.9e-39	334	405	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elqk+k+kLls+l+eV++rYk+y++q+++v+ssFeavag g+a++Y +lA+ka+SrhFrcLkd i++qi PON97805.1 334 EFMELQKRKTKLLSMLDEVERRYKHYCDQMKAVVSSFEAVAGAGAATVYSALASKAMSRHFRCLKDGIVNQI 405 679********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MARELCEDKS RNMVSSAGFC YSDVSPSNNP SPAHIQTQFT NQIQDFHESN PEIFNLTTGM 60 EIIGFAKSTD ASTNDTTTAT TTNPSPSSSS MWKAFTISKA GPSSSKTINE STTSHDHHDH 120 DDHHQHQFYD HFTTGISETS SENLMVGPDQ HHHHHQQSTG GWAQENRFLV DDSSLRCVFP 180 CEGNEKPSQG LSLTLNSANP SSIGLQSFEL RQTNHHHQQD HHDHMRFISA NSRDGFFGKP 240 ANIQPQQMDI NINQDGFLGK SVNLHHQGQF QLRNSKYLNP AQELLNEFCS LGTKHTDLMT 300 KQKSQKLSKQ WEDQADNGSS GASSSKKQSL YSLEFMELQK RKTKLLSMLD EVERRYKHYC 360 DQMKAVVSSF EAVAGAGAAT VYSALASKAM SRHFRCLKDG IVNQIQATRK AMGEKDAAGA 420 APGTTRGETP RLRILDQTLR QQRAFQQMTM MESHPWRPQR GLPERSVSVL RAWLFEHFLH 480 PYPSDVDKHI LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYLEETKERE ANNNNNSCSN 540 NNMGGASSDG AVTVDILRDP TRPPTRNQPE QDRKPTADQL VRIDSECLSS IVINPDKSGG 600 SSKSTLQNHQ HIQRQQNFGR FGEVSFGSSM QELDFSSYNQ AAGQSVLYAN HDQNNGNRHA 660 GFSGGGGGGG GVSLTLGLQQ HAGGGSHGGV SLAFSPASQS SLFYTRDHID DQCQPAAAVQ 720 YSLLDGEAQN LPYRNLMGAQ LLHDLA

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MARELCEDKS RNMVSSAGFC YSDVSPSNNP SPAHIQTQFT NQIQDFHESN PEIFNLTTGM  60
EIIGFAKSTD ASTNDTTTAT TTNPSPSSSS MWKAFTISKA GPSSSKTINE STTSHDHHDH  120
DDHHQHQFYD HFTTGISETS SENLMVGPDQ HHHHHQQSTG GWAQENRFLV DDSSLRCVFP  180
CEGNEKPSQG LSLTLNSANP SSIGLQSFEL RQTNHHHQQD HHDHMRFISA NSRDGFFGKP  240
ANIQPQQMDI NINQDGFLGK SVNLHHQGQF QLRNSKYLNP AQELLNEFCS LGTKHTDLMT  300
KQKSQKLSKQ WEDQADNGSS GASSSKKQSL YSLEFMELQK RKTKLLSMLD EVERRYKHYC  360
DQMKAVVSSF EAVAGAGAAT VYSALASKAM SRHFRCLKDG IVNQIQATRK AMGEKDAAGA  420
APGTTRGETP RLRILDQTLR QQRAFQQMTM MESHPWRPQR GLPERSVSVL RAWLFEHFLH  480
PYPSDVDKHI LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYLEETKERE ANNNNNSCSN  540
NNMGGASSDG AVTVDILRDP TRPPTRNQPE QDRKPTADQL VRIDSECLSS IVINPDKSGG  600
SSKSTLQNHQ HIQRQQNFGR FGEVSFGSSM QELDFSSYNQ AAGQSVLYAN HDQNNGNRHA  660
GFSGGGGGGG GVSLTLGLQQ HAGGGSHGGV SLAFSPASQS SLFYTRDHID DQCQPAAAVQ  720
YSLLDGEAQN LPYRNLMGAQ LLHDLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-143	TALE family protein