PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON97766.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | WRKY | ||||||||
Protein Properties | Length: 199aa MW: 22412.1 Da PI: 9.5514 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.5 | 1e-31 | 120 | 178 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrC++++C+vkk+++r ++d ++v++tYeg Hnh+ PON97766.1 120 LDDGYRWRKYGQKTVKNSSHPRSYYRCSHHTCSVKKQIQRLSKDSSIVVTTYEGIHNHP 178 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDEEIPLSQC PLSFPNTPNS LPSTSSSVHL PFEYSQFSLE VLSWLGLLSG STNIDCDNYT 60 QKLSSSPSDQ SFKAKNTSGS KLGDNKNNNN GGENKAKVGR KKKAIPQRIS FHTRSDDDVL 120 DDGYRWRKYG QKTVKNSSHP RSYYRCSHHT CSVKKQIQRL SKDSSIVVTT YEGIHNHPCE 180 KLMETLGPLL KQLQFLSRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64000.1 | 8e-60 | WRKY family protein |