PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97660.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 472aa    MW: 52975.9 Da    PI: 6.1091
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4685.4e-143474691374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA++v+sg+le+a+ +L+++s+laspdgd+mqR+aayfteALa r+++s+++l kal++++ s    s+e+ ++klf+e++P+lk++++++N
  PON97660.1  47 LIHLLLTCANHVASGSLENANIALEQISQLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTRIS--LISDEILVRKLFFELFPFLKVAFVLTN 143
                 689*************************************************************999987..79************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege++vHiiD+ +s+++QW+aLlq L++R+egpp+lRiT+v++    +ke le++++rL++ Ae+l++pf+fn+ + ++le+l++e+Lrvk+
  PON97660.1 144 QAITEAIEGEKMVHIIDLHASEPAQWVALLQVLSARTEGPPHLRITAVHQ----QKEVLEQMAHRLTEEAEKLDIPFQFNP-IISKLENLDMEKLRVKT 237
                 **************************************************....9**************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll......................................................desvsles..erdevLklvkslsPkvvvv 241
                 gEal+V++vlqlh+ll                                                      ++++sl+   + d++L+++++l Pk++vv
  PON97660.1 238 GEALVVSSVLQLHSLLasddellrkksplgpknlngthfpralqmsqstlgellekdlvngyspspdsasSSPLSLNGsaKMDSFLNALWGLTPKLMVV 336
                 ********************************************************************9966666655567899*************** PP

        GRAS 242 veqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
                 +eq+++hn+++++er+leal+ y+alfd+le++++r+  er+kvE++l+g+ei+n++acegaer+erhe+l kW +r+++aGF ++pls++ ++qa++l
  PON97660.1 337 TEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTPLERQKVEKMLFGEEIKNIIACEGAERKERHEKLDKWIQRVDSAGFVNIPLSYYGMMQARRL 435
                 *************************************************************************************************** PP

        GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 l+ ++ dgy++ ee+g ++++W+drpL+s+SaWr
  PON97660.1 436 LQGYGCDGYKIREENGNVLICWQDRPLYSISAWR 469
                 *********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MAFQDEGSSS VTSSPLQFFS MMSLSPSLGT PYPWLKELKS EERGLYLIHL LLTCANHVAS  60
GSLENANIAL EQISQLASPD GDTMQRIAAY FTEALADRIL KSWPGLHKAL NSTRISLISD  120
EILVRKLFFE LFPFLKVAFV LTNQAITEAI EGEKMVHIID LHASEPAQWV ALLQVLSART  180
EGPPHLRITA VHQQKEVLEQ MAHRLTEEAE KLDIPFQFNP IISKLENLDM EKLRVKTGEA  240
LVVSSVLQLH SLLASDDELL RKKSPLGPKN LNGTHFPRAL QMSQSTLGEL LEKDLVNGYS  300
PSPDSASSSP LSLNGSAKMD SFLNALWGLT PKLMVVTEQD SNHNGSTLME RLLEALYSYA  360
ALFDCLESTV SRTPLERQKV EKMLFGEEIK NIIACEGAER KERHEKLDKW IQRVDSAGFV  420
NIPLSYYGMM QARRLLQGYG CDGYKIREEN GNVLICWQDR PLYSISAWRC RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein