PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97557.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HD-ZIP

Protein Properties

Length: 265aa MW: 29738.7 Da PI: 4.735

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7e-19	56	110	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++f+++q++ Le++Fe + + +++ +LA++lgL+ rqV +WFqN+Ra++k PON97557.1 56 NNKRRFSDDQIKSLESMFETETRLEPRKKLQLATELGLQPRQVAIWFQNKRARWK 110 56789*************************************************9 PP
2	HD-ZIP_I/II	117.1	1e-37	57	148	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s++q+k+LE++Fe+e++Lep++K +la+eLglqprqva+WFqn+RAR+k+kqlE+dy+ L ++y++l+++ e L+k+++ L +l++ PON97557.1 57 NKRRFSDDQIKSLESMFETETRLEPRKKLQLATELGLQPRQVAIWFQNKRARWKSKQLERDYSILLANYNTLASRFEGLKKDKQGLVLQLQK 148 79************************************************************************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MFEDQTIIHG EYSYCPISEA FDSNSHHETT FSSSNNSSSS SSGVVLGTTR KKKSKNNKRR 60 FSDDQIKSLE SMFETETRLE PRKKLQLATE LGLQPRQVAI WFQNKRARWK SKQLERDYSI 120 LLANYNTLAS RFEGLKKDKQ GLVLQLQKLN ADLVQSSKGT DNDKDSDSGK RTESESEANK 180 PSLSSLEKSE HVLGVLSDDD SSMKAEYDFG GGVLEPAEEA ELLSMNMAEP AADSSLTSPE 240 DWGSLNSETL FAESTGGYQW WDFWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	5e-57	HD-ZIP family protein