PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97544.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 501aa MW: 54841.4 Da PI: 5.7795

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	313	358	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L PON97544.1 313 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 358 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MEDLMISPSS SSSLVSLSHE AAAPPSLQQR LQFIVQSQPD WWAYAIFWQT SSDDSGRLFL 60 AWADGHFQGP KHTASPPTSG AVHAERRKIL KGIQSLIGTD NSMGDITDSG ADVTDAEWFY 120 VMSLTRSFLA GDGVPGKALS SGSLVWLTGG HELQFYNCDR AKEAHFHGIE TLVCIPTSSG 180 VLELGSYEIV RENWGLVQQA KSLFGSDPGP IQFLSGNISF ADIGIIAGVQ EEDEDEHNNN 240 NNKKKETTLD LMKTTTAMTT TKRKKEQGGG PNNYLAESEH SDSDCPLAGD AIKQRAPKKR 300 GRKPGLGRDT PLNHVEAERQ RREKLNHRFY ALRAVVPNVS RMDKASLLSD AVSYINELKA 360 KIDELESQLL VQQRETNNNS KRVKLEMADN LDNQSTTTSV DQARPNNNNS TSSGSAAVVA 420 AGVEVEVKIV GTDAMIRVQS ENVNYPSARL MGALRELEFQ VHHASVSTIN ELMLQDVVIK 480 VPDQGMRTDP EAVKAAILRS L

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MEDLMISPSS SSSLVSLSHE AAAPPSLQQR LQFIVQSQPD WWAYAIFWQT SSDDSGRLFL  60
AWADGHFQGP KHTASPPTSG AVHAERRKIL KGIQSLIGTD NSMGDITDSG ADVTDAEWFY  120
VMSLTRSFLA GDGVPGKALS SGSLVWLTGG HELQFYNCDR AKEAHFHGIE TLVCIPTSSG  180
VLELGSYEIV RENWGLVQQA KSLFGSDPGP IQFLSGNISF ADIGIIAGVQ EEDEDEHNNN  240
NNKKKETTLD LMKTTTAMTT TKRKKEQGGG PNNYLAESEH SDSDCPLAGD AIKQRAPKKR  300
GRKPGLGRDT PLNHVEAERQ RREKLNHRFY ALRAVVPNVS RMDKASLLSD AVSYINELKA  360
KIDELESQLL VQQRETNNNS KRVKLEMADN LDNQSTTTSV DQARPNNNNS TSSGSAAVVA  420
AGVEVEVKIV GTDAMIRVQS ENVNYPSARL MGALRELEFQ VHHASVSTIN ELMLQDVVIK  480
VPDQGMRTDP EAVKAAILRS L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	265	KKKETTLDLMKTTTAMTTTKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46830.1	3e-64	bHLH family protein