PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97477.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 311aa    MW: 34830 Da    PI: 6.7653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20102151255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  PON97477.1 102 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALAYDEAALRFKG 151
                 7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MHHGNKRPFP SDESEEKEDQ DSIFPIYSAR SQQDMSAMVS ALARVIGSNH ININDDHQPQ  60
ADPVLQHMHG NPSLIATGPS GLAEHVQSHH TVQDDQGTKR RHYRGVRQRP WGKWAAEIRD  120
PKKAARVWLG TFDTAEAAAL AYDEAALRFK GSKAKLNFPE RVQGGTSSNS TTSTDHQLST  180
CNNLITYTTS NQEYHDHSRS MSTSSTTTPP PPYDHVPLSQ PAIQYGQFLP SGINSNIISY  240
DHNNRNFPPS STFYGSGERF NILSHQLPPP SDQQLQDQQH ELLRLSMQFG SSNNDSSTMS  300
DRFSNSRRDY D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.15e-42ERF family protein