PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97398.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

E2F/DP

Protein Properties

Length: 459aa MW: 50670.7 Da PI: 4.6157

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.6	1.8e-27	150	215	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg PON97398.1 150 RYDSSLGLLTKKFINLIKQAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 215 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MSGGGRAPSR PAPPPPPPVA SGGAAQIVPP LRRHLAFTST KPPFVPPDDY HRFSGDARRA 60 ADQEPEAIVV RSPLLKRKNA LENNEVDRHD WTSSPGYINV VNSPMQTPVS AKGGRTYNRS 120 KGSKGNKSAP QTPVSNAGSP SPLTPAGSCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA 180 ETLEVQKRRI YDITNVLEGI GLIEKKLKNR IRWKGLDASR PGEVDGDISL LQAEVENLNL 240 EERRLDDQIR EMQERLRDLS EDETNQKWLF VTEEDIKGLP CFQNETLIAI KAPHGTTLEV 300 PDPDEAVDYP QRRYRIILRS TMGPIDVYLV SQFEEKFEDI NGAEPPANFP IASSLGSSEP 360 TATELVTVES TGKEIEPQEQ QDHQMCADIN ASQEFTGGMM KIVPSDVDND ADYWLISDAE 420 VSITDMWRTD SGVDWDGANM LHPDFGMPDV STPRPQTPP

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MSGGGRAPSR PAPPPPPPVA SGGAAQIVPP LRRHLAFTST KPPFVPPDDY HRFSGDARRA  60
ADQEPEAIVV RSPLLKRKNA LENNEVDRHD WTSSPGYINV VNSPMQTPVS AKGGRTYNRS  120
KGSKGNKSAP QTPVSNAGSP SPLTPAGSCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA  180
ETLEVQKRRI YDITNVLEGI GLIEKKLKNR IRWKGLDASR PGEVDGDISL LQAEVENLNL  240
EERRLDDQIR EMQERLRDLS EDETNQKWLF VTEEDIKGLP CFQNETLIAI KAPHGTTLEV  300
PDPDEAVDYP QRRYRIILRS TMGPIDVYLV SQFEEKFEDI NGAEPPANFP IASSLGSSEP  360
TATELVTVES TGKEIEPQEQ QDHQMCADIN ASQEFTGGMM KIVPSDVDND ADYWLISDAE  420
VSITDMWRTD SGVDWDGANM LHPDFGMPDV STPRPQTPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	0.0	E2F/DP family protein