PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97316.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 341aa    MW: 37445.4 Da    PI: 9.657
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.23.8e-1371115147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT +E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PON97316.1  71 RESWTDQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 115
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MVSVNRNPAP AFYFFDPMNM GLPGLSSAPP PAAAARNSTT VAPAAAAANT TSFGDDPNKK  60
IRKPYTITKS RESWTDQEHD KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ  120
KSGTTEHVPP PRPKRKAAHP YPQKAPKNAP NVTHVTGPFQ SSAASLEPGY IYRPDSSSVL  180
GNPVNGAALP SWSYSSVPPV NVTQVNKDDG RLFVPTVANN SCYSSSTEST PRTKPASEII  240
DPRVPSKAMR VMPDFAQVYS FIGSVFDPNA TGHLQRLKQM DPINLETALL LMRNLSVNLM  300
SPEFEDLRKL LSSYDIDEDM VDKSIGTSNF PFKSENAILS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.26e-95MYB_related family protein