PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97197.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 417aa MW: 46705.6 Da PI: 6.0294

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.4e-14	207	258	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+ PON97197.1 207 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 258 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MERLQGPINP YFLGDHMDME CFEQGIATTS SGSLRFEEEE DQACLLTPGL DDRMPFLQML 60 QSVESPSFLP LKDPSFQTLL RLQHLKKPWE MNINDSCHHN MPQLDSQIQG LEFESCVTNE 120 IVELHSPNVK LEAKDVQYPH SSSGPDQGGV SLECNHERQP NSVENCVNDP QTTFKHTQNA 180 KSPPVSRERR KRKRTRPAKN KEEVESQRMT HIAVERNRRR QMNDHLNVLR SLMPTSYIQR 240 GDQASIVGGA IDFVKELEQL LQSLEAQKRM RKAEGGNGVD NSVCSSSSSS STAAAMPSNG 300 LFMSLSQFRI GPEEENITSL GDGVRAENKS EAADIEVTVI QTHVNLKIQC PRRPGQLLKA 360 IVALEDLRLA ILHLNITSSH TTVFYSFNLK IEEGCKLGSA DEIAGAVHQI FRFIEGT

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MERLQGPINP YFLGDHMDME CFEQGIATTS SGSLRFEEEE DQACLLTPGL DDRMPFLQML  60
QSVESPSFLP LKDPSFQTLL RLQHLKKPWE MNINDSCHHN MPQLDSQIQG LEFESCVTNE  120
IVELHSPNVK LEAKDVQYPH SSSGPDQGGV SLECNHERQP NSVENCVNDP QTTFKHTQNA  180
KSPPVSRERR KRKRTRPAKN KEEVESQRMT HIAVERNRRR QMNDHLNVLR SLMPTSYIQR  240
GDQASIVGGA IDFVKELEQL LQSLEAQKRM RKAEGGNGVD NSVCSSSSSS STAAAMPSNG  300
LFMSLSQFRI GPEEENITSL GDGVRAENKS EAADIEVTVI QTHVNLKIQC PRRPGQLLKA  360
IVALEDLRLA ILHLNITSSH TTVFYSFNLK IEEGCKLGSA DEIAGAVHQI FRFIEGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	194	RRKRKR
2	208	219	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	8e-80	bHLH family protein