PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97132.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 376aa MW: 42398.6 Da PI: 6.9642

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	193	239	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq PON97132.1 193 DHIMAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYVKQLQ 239 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MDVASARWLS EMAVEDYHDI FHQCEIHSLN QLGFASDDHT VGENYKKSLS SESYSSYSTV 60 TTKNNNPSIS TSSGSDSVKN SHQAMEKKPS FSSSSSQLLS FDQKYSNSPP NSKPHDHQQL 120 LIYGNLDDMS TTLKPKKEAV SQIDVHFSSH VITNKDSLIK KEDHSCEPIT VFNKGNNKRP 180 YSAMTRTPSH AQDHIMAERK RREKLSQRFI ALSAIVPGLK KMDKASVLGD AIKYVKQLQE 240 RVNILEEQTK KRTVESVVFI KKSQVSADEQ DSSSCDQNFD GRSHDQDYHQ ALPEIEARVS 300 EKDVLIRIHC EKQKGVAVKI LSEIEKLDHL SVVNTSVFPF GNSTLDITII AQMDEEFSMA 360 VKDLVKNLRE ALLKFM

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MDVASARWLS EMAVEDYHDI FHQCEIHSLN QLGFASDDHT VGENYKKSLS SESYSSYSTV  60
TTKNNNPSIS TSSGSDSVKN SHQAMEKKPS FSSSSSQLLS FDQKYSNSPP NSKPHDHQQL  120
LIYGNLDDMS TTLKPKKEAV SQIDVHFSSH VITNKDSLIK KEDHSCEPIT VFNKGNNKRP  180
YSAMTRTPSH AQDHIMAERK RREKLSQRFI ALSAIVPGLK KMDKASVLGD AIKYVKQLQE  240
RVNILEEQTK KRTVESVVFI KKSQVSADEQ DSSSCDQNFD GRSHDQDYHQ ALPEIEARVS  300
EKDVLIRIHC EKQKGVAVKI LSEIEKLDHL SVVNTSVFPF GNSTLDITII AQMDEEFSMA  360
VKDLVKNLRE ALLKFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	203	ERKRRE
2	199	204	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-68	bHLH family protein