PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97131.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 308aa    MW: 34383 Da    PI: 6.4089
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.38.5e-16155199655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++Er+RR+++N+ f  L  llP++     kK++K++iLe+A++YIk+Lq
  PON97131.1 155 VIAERKRRENLNKLFMALSALLPSL-----KKMDKSSILEEAIKYIKQLQ 199
                 589**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDMTSSMWLS EPEVKDLILT DEYEVSSEFM TAAFLNEGLH HIFTSKSDSS SPFFTPTDYS  60
GTSCVSGILE KPDHSSSSTQ SMLYHESSSF TPSFSDTVPK SFHQFNGNSI GAKNQDCNAG  120
HFSCTNEEDR ATVGQGTKKR ANNITKPATQ LRDNVIAERK RRENLNKLFM ALSALLPSLK  180
KMDKSSILEE AIKYIKQLQE EEKKLIEVQS RDRVTESRVI MKKAEIFEVG DEISANTMED  240
SLLKIEAKMS GKQVLLRIHC QKQKGALAKA LTEVEKLNLT VINSSALPFG NLTLDITIIA  300
QWKNNAIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-36bHLH family protein