PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97112.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 343aa    MW: 38429.6 Da    PI: 4.7055
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-12175218654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PON97112.1 175 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 218
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MELTQHGFLE ELLAPRKDNW SSFSTGLNDQ FLSSGWSFDS YEENPVLAIS NPPFLGFSTP  60
AEANSECPLF DQAYPFVDHG AVLMPELQSS YTKISHHEDY PSMIEDEDQF GFLGCENQSS  120
ALEESKTSSC KVELMEQSSA EMVVPAFNMG LCSSISGEKK STRPKKLEGQ PSKNLMAERR  180
RRKRLNDRLS MLRSIVPKIS KMDRTSILGD TIDYMKELLE RISKLQEEGI EDGTNKMINL  240
LGISKELKPS EVLVRNSPKF DVERREIDTR IDICCAAKPG LLLSTVNTLE SLGLEIQQCV  300
ISCFNDFSMQ ASCSEGAQQR TLINSEDIKQ AIFRNAGYGG RCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178185ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-91bHLH family protein