PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97023.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 593aa    MW: 68101.7 Da    PI: 10.0158
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.82e-1374166698
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 
                 ++++ +k++ + +p +fa++h+++  +s++++l+   + +sW  k++ + ++    +++ W  F+ +++Lke D+++F+l+++ +e  l+v ++r
  PON97023.1  74 LQPYITKNSSVHVPAEFARRHNLDRCSSTEIQLQAhNEKKSWPAKFTLTASR--ARISQRWGPFAASKNLKEEDVCIFELISKpKEILLKVWIYR 166
                 4788999999************9*99********96777*******555555..568999*********************97677666666665 PP
2B345.31.5e-14235326197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffk +++s  l ++ l lp +f +e+g +   s+  tl  ++g +W+v ++ + k +++++ +GW eFv+   ++ g ++vF+++g+s+f  +v++f
  PON97023.1 235 FFKLMIRSTILDRK-LLLPEEFSAEFGVE--LSTVATLIAPNGCTWRVGIKKSSKNNMIWFLDGWHEFVEYYSIDFGYSLVFRYEGNSKF--RVMIF 326
                 89******999998.9*******999844..8999***************777777779999************************9999..88887 PP
3B342.21.5e-135055761588
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                  +++p +fa+++    ++s  +tle ++g++  v+ +   +s++  l+kGW +F ++n L+egD++vF+l++++
  PON97023.1 505 YVYVPADFARKYLP--NSSELITLEAPNGEQRVVTSNGYPSSCSKRLEKGWGRFLRENYLEEGDVCVFELINSK 576
                 4799********53..36678********8877777668899999************************99754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MDSPSPVSVK RSKPKESYNK SRSTDDKEDA DQMLVPRNLS FTESKRLVMS KETEKAVGAA  60
TASKLGNPSF MLILQPYITK NSSVHVPAEF ARRHNLDRCS STEIQLQAHN EKKSWPAKFT  120
LTASRARISQ RWGPFAASKN LKEEDVCIFE LISKPKEILL KVWIYRAADY AVELLPKQAS  180
AFLCFSNPCI FSDIVPFHSK PSWFLMPPTR RYVRRRVGQS RGGLRRPTRI SPSQFFKLMI  240
RSTILDRKLL LPEEFSAEFG VELSTVATLI APNGCTWRVG IKKSSKNNMI WFLDGWHEFV  300
EYYSIDFGYS LVFRYEGNSK FRVMIFHNVT GCQIEYPSDD QSSDAESDFI NQNDEDTDED  360
SEERADIFNA KPFTSNIGSS KTIRKCFSKR SIGRPSFGSP KLGNSYEKTR SQRCELDQSS  420
QSEMDRINIL RKGKQKMSEK TSQRNILVTQ EDGEDFFVPK SLRHKNKNRR FAKPRENKKA  480
IQAATMNKLN NPSFMIIIKP HNKTYVYVPA DFARKYLPNS SELITLEAPN GEQRVVTSNG  540
YPSSCSKRLE KGWGRFLREN YLEEGDVCVF ELINSKIIVL KVWMYRVADY AGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-46B3 family protein