PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97021.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 448aa MW: 51673.3 Da PI: 10.05

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.8	1.9e-13	342	433	10	98
HHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 ++++ + +p +f+++h+ ++ +++++ + r+W v++ + +++ +++GW +F ++ LkegD +vF+++++ +e l+v ++r PON97021.1 342 IMSQHAFDVPAEFVKRHMRW--CPEMIQVQAcDEKRKWPVRCFFkypTRSCTIKRMGRGWGSFSTSQSLKEGDLCVFEMISKvKEVVLRVLIYR 433 56778899*******855..8889999996777***775555555558899*******************9998788888888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MEAMQRTRRR KIRPSRNHRR KSDSQPKTTP LFALVMNETA IVEYKLRIPK KSATIFGEEL 60 SEWATLTVPC GHGPWQVKVK KNGEKNIWLI DGVEEFIKYY SIHFCSILQF TYQGNSVFSV 120 RICDALGSEI EYPFNDSMSE EYSEKDLSND DYSVELVDSR PSISRVPFGK QEEDTRVDDY 180 SVEILDIKPT ISHGSSRRKA LNGGLQQESL GKRTRKVFPQ RVGGKHRKRG RDAAFMDHRV 240 RSEFLYRTRS KSCVKEEQEE VKELGNADIS GRSKLIGNNN KSGSRDFPVK HDEDVDMILP 300 RIFTYSRGKG PVMSKETEKA ARAAFACKLR NPSFMVIITP FIMSQHAFDV PAEFVKRHMR 360 WCPEMIQVQA CDEKRKWPVR CFFKYPTRSC TIKRMGRGWG SFSTSQSLKE GDLCVFEMIS 420 KVKEVVLRVL IYRAADYAGP PEKRLKSK

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MEAMQRTRRR KIRPSRNHRR KSDSQPKTTP LFALVMNETA IVEYKLRIPK KSATIFGEEL  60
SEWATLTVPC GHGPWQVKVK KNGEKNIWLI DGVEEFIKYY SIHFCSILQF TYQGNSVFSV  120
RICDALGSEI EYPFNDSMSE EYSEKDLSND DYSVELVDSR PSISRVPFGK QEEDTRVDDY  180
SVEILDIKPT ISHGSSRRKA LNGGLQQESL GKRTRKVFPQ RVGGKHRKRG RDAAFMDHRV  240
RSEFLYRTRS KSCVKEEQEE VKELGNADIS GRSKLIGNNN KSGSRDFPVK HDEDVDMILP  300
RIFTYSRGKG PVMSKETEKA ARAAFACKLR NPSFMVIITP FIMSQHAFDV PAEFVKRHMR  360
WCPEMIQVQA CDEKRKWPVR CFFKYPTRSC TIKRMGRGWG SFSTSQSLKE GDLCVFEMIS  420
KVKEVVLRVL IYRAADYAGP PEKRLKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-17	B3 family protein