PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96977.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 503aa MW: 54952.9 Da PI: 9.6952

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.7	4.8e-12	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + +g +t q++s+ qky PON96977.1 60 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 104 789***************77.*****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MVSKNPNPPE GFYLDPTGMA LPGLGPFAAV TATATTASTT SSSEDLSKKI RKPYTITKSR 60 ESWTEPEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK SGTSEHLPPP 120 RPKRKAAHPY PQKASKNSQA PAVLQVPGAF QSSSALLEPG YIQMPDSSLR SPVAGAAISS 180 WTNNSVQTVN LSNGTKAAAP SVANNCCSST ESTPGARPTG ETTDLGNHSH QLRVLPDFAQ 240 VYGFIGSVFD PNATGHLQKL KKMDQIDVET VLLLMRNLSI NLTSPDFEDH RRLLASYEIE 300 SGTTNHSDAV RTFNDDQLMN VAKIIIPEKN RKEICKYLFQ EGVCYAKKDY NLPKHPDIDV 360 PNLQVIKLMQ SFKSKEYVRE TFAWMHYYWY LTNDGIEHLR TYLNLPSEIV PATLKKSAKP 420 PSRPFGGPPG DRPRGPSRFE GGSRFGDRDG YRGGPRGPSG DFAGDKGGAP ADFQPSFRGA 480 GGRPGFGRGG GGYGAAPPSS SFS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MVSKNPNPPE GFYLDPTGMA LPGLGPFAAV TATATTASTT SSSEDLSKKI RKPYTITKSR  60
ESWTEPEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK SGTSEHLPPP  120
RPKRKAAHPY PQKASKNSQA PAVLQVPGAF QSSSALLEPG YIQMPDSSLR SPVAGAAISS  180
WTNNSVQTVN LSNGTKAAAP SVANNCCSST ESTPGARPTG ETTDLGNHSH QLRVLPDFAQ  240
VYGFIGSVFD PNATGHLQKL KKMDQIDVET VLLLMRNLSI NLTSPDFEDH RRLLASYEIE  300
SGTTNHSDAV RTFNDDQLMN VAKIIIPEKN RKEICKYLFQ EGVCYAKKDY NLPKHPDIDV  360
PNLQVIKLMQ SFKSKEYVRE TFAWMHYYWY LTNDGIEHLR TYLNLPSEIV PATLKKSAKP  420
PSRPFGGPPG DRPRGPSRFE GGSRFGDRDG YRGGPRGPSG DFAGDKGGAP ADFQPSFRGA  480
GGRPGFGRGG GGYGAAPPSS SFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52660.2	1e-117	MYB_related family protein