PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96871.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 101aa    MW: 12351 Da    PI: 9.7117
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.39.9e-103675445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++l+++ +++ G + W++Ia +++ gRt++++  +w 
       PON96871.1 36 MTKQEEDLIYRMFNLVGER-WDLIAGRIP-GRTAEEIERFWT 75
                     69*****************.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
METYRGPCRR RKQAKHTNNF ESDQEVSSLE WEFISMTKQE EDLIYRMFNL VGERWDLIAG  60
RIPGRTAEEI ERFWTMRHHD MFAERRKKQK IETSKVDGRR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.12e-33MYB_related family protein