PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96664.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARF

Protein Properties

Length: 641aa MW: 71830.1 Da PI: 6.0407

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	81	1.2e-25	61	160	1	97
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+ltpsd++++g +++pk++a+e+ + ++ ++l+ +d++g +W +++iyr++++r++lt+GW+ Fv+a++L +gD +vF + +++el PON96664.1 61 FSKTLTPSDTSTHGGFSVPKRHADECfpqldmlQ--QPPVQELVAKDLHGFEWHFRHIYRGQPKRHLLTSGWSTFVSAKRLVAGDACVFL--RGENGEL 155 88***************************654..444458**********************************************..4499999 PP EEEEE CS B3 93 vvkvf 97 +v+v+ PON96664.1 156 RVGVH 160 99986 PP
2	Auxin_resp	89.5	6.1e-30	189	271	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a h++st++ F+v+Y+P++s++eF++++++++k++++ + +G++f + fe+e+ e+rlsG++vgv+d d +rWp+S+Wr+Lk PON96664.1 189 AFHSISTGTLFTVYYRPWTSPAEFIIPCDEFMKSTENDYLPGTKFGFGFEGEEYIEKRLSGIIVGVEDHDGIRWPGSEWRCLK 271 6799*****************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MPIYNLPSKI LCKVVHIELK AEAQTDEVFA QITLLPLTED EMSSEDEDIL PMPQRTRVFS 60 FSKTLTPSDT STHGGFSVPK RHADECFPQL DMLQQPPVQE LVAKDLHGFE WHFRHIYRGQ 120 PKRHLLTSGW STFVSAKRLV AGDACVFLRG ENGELRVGVH HAMKRRTPNN ASTSVISGHS 180 MQHGILASAF HSISTGTLFT VYYRPWTSPA EFIIPCDEFM KSTENDYLPG TKFGFGFEGE 240 EYIEKRLSGI IVGVEDHDGI RWPGSEWRCL KVQWDAQLNT TMLPGRLSPW NIKPIDSTSK 300 TETVVRPPPK RGHELDLPTP GFSSLAREGL LLNPVKRTPQ RHKEVLQGQE ISDIHGHESG 360 ARIQPISPKY ILPPDPDWKQ TQLQFENQLH FPCYQCPGKE IPFPGETRVT TSLTNQWCST 420 FATYGVCESV AFTGSFSVSN GNSSNSGSQE CTAFKQRSDD IAPCYPNGCD KYMLFGVNLF 480 HSHPELPSPQ VATSSELLST FSFPPTSQSS SVSEPVQVSD TSKSVSDVVL EKQCKQCCSI 540 SNRSCTKVLK HGTALGRSVD LTHFDGYEEL ISELDQMFDF KGSLIDGSSE WQVTYMDDEG 600 DWMLVGDYEW QAFRSAVRRM FICPKDEINK LNPGSLNLVS I

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MPIYNLPSKI LCKVVHIELK AEAQTDEVFA QITLLPLTED EMSSEDEDIL PMPQRTRVFS  60
FSKTLTPSDT STHGGFSVPK RHADECFPQL DMLQQPPVQE LVAKDLHGFE WHFRHIYRGQ  120
PKRHLLTSGW STFVSAKRLV AGDACVFLRG ENGELRVGVH HAMKRRTPNN ASTSVISGHS  180
MQHGILASAF HSISTGTLFT VYYRPWTSPA EFIIPCDEFM KSTENDYLPG TKFGFGFEGE  240
EYIEKRLSGI IVGVEDHDGI RWPGSEWRCL KVQWDAQLNT TMLPGRLSPW NIKPIDSTSK  300
TETVVRPPPK RGHELDLPTP GFSSLAREGL LLNPVKRTPQ RHKEVLQGQE ISDIHGHESG  360
ARIQPISPKY ILPPDPDWKQ TQLQFENQLH FPCYQCPGKE IPFPGETRVT TSLTNQWCST  420
FATYGVCESV AFTGSFSVSN GNSSNSGSQE CTAFKQRSDD IAPCYPNGCD KYMLFGVNLF  480
HSHPELPSPQ VATSSELLST FSFPPTSQSS SVSEPVQVSD TSKSVSDVVL EKQCKQCCSI  540
SNRSCTKVLK HGTALGRSVD LTHFDGYEEL ISELDQMFDF KGSLIDGSSE WQVTYMDDEG  600
DWMLVGDYEW QAFRSAVRRM FICPKDEINK LNPGSLNLVS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	1e-126	ARF family protein