PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96479.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 283aa    MW: 30152.3 Da    PI: 5.637
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.22e-2973131259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY  +Hnh+
  PON96479.1  73 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTRLIITYACDHNHP 131
                 69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDRRFHTKPF VDAEPISENG PDSPSSGDDM VKTTTTFEPS PKKSKRGVQK RVVSVPIGDV  60
EGSKSKGEAY PPSDSWAWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV ERSRVDPTRL  120
IITYACDHNH PIPTKSHSST TTAAAAATAA ASAATAATSA NSGADGVQDN EIAVFSGQTD  180
LDLSDGSEVL LSGCGYHRHH QWFDDDDVVS TAVVLESPLF EGGGGGYAVG DVSMAVSGED  240
ESLFADLGEL PECSVVFRRR IVEPDEQNRR CSLSAVPCCG STG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-75WRKY family protein