PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96446.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 446aa MW: 50532.5 Da PI: 6.7858

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.5	3e-33	115	168	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+e+AtPk +l+lm+vkgLt++hvkSHLQ+YR+ PON96446.1 115 PRLRWTPDLHRAFVHAVERLGGQERATPKLVLQLMNVKGLTIAHVKSHLQMYRS 168 8****************************************************7 PP
2	Myb_DNA-binding	52	1.6e-16	116	167	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ + m+ kg+t ++ks++q+y+ PON96446.1 116 RLRWTPDLHRAFVHAVERLGGQeraTPKLVLQLMNvKGLTIAHVKSHLQMYR 167 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MAEKIEMHED NITDRSNIQA TKTSSLNFSL KCSLFDLNEE ANIGADDELG DCGIINNNEV 60 PRSEECVGDQ DRTISPEADD DDDLSCNKAT VLEEKEIGSN STTSAVRPYV RSKLPRLRWT 120 PDLHRAFVHA VERLGGQERA TPKLVLQLMN VKGLTIAHVK SHLQMYRSKK LDESGQVISQ 180 RSTPMQGKDH ILQMYQRFNP YGSFTMDSRS HIFPSTFVDP SSPHANSSRY QHPWALDDDC 240 LTRSGPLWNK NFGTDKKGDP MIDKIMVQNG NKRSISSLNI FDIRDAIIRT VPFRPSQFLE 300 EKKWPPREMI NGTHRNIIRR TSQSQLCFSR GDNSSNSYDA QTKANINPLF QLKSTISTSL 360 DPSLFISNSF EPKLDTFSQL AADQRLRTKQ YEAQERLKEK NCCPSLHLSL GHSYDVSDTD 420 NTQEICKTET ETMLSLSLST TSSRKQ

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MAEKIEMHED NITDRSNIQA TKTSSLNFSL KCSLFDLNEE ANIGADDELG DCGIINNNEV  60
PRSEECVGDQ DRTISPEADD DDDLSCNKAT VLEEKEIGSN STTSAVRPYV RSKLPRLRWT  120
PDLHRAFVHA VERLGGQERA TPKLVLQLMN VKGLTIAHVK SHLQMYRSKK LDESGQVISQ  180
RSTPMQGKDH ILQMYQRFNP YGSFTMDSRS HIFPSTFVDP SSPHANSSRY QHPWALDDDC  240
LTRSGPLWNK NFGTDKKGDP MIDKIMVQNG NKRSISSLNI FDIRDAIIRT VPFRPSQFLE  300
EKKWPPREMI NGTHRNIIRR TSQSQLCFSR GDNSSNSYDA QTKANINPLF QLKSTISTSL  360
DPSLFISNSF EPKLDTFSQL AADQRLRTKQ YEAQERLKEK NCCPSLHLSL GHSYDVSDTD  420
NTQEICKTET ETMLSLSLST TSSRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-38	G2-like family protein