PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96432.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 338aa MW: 37654.4 Da PI: 9.8973

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.7	1.7e-14	31	123	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+++ + +L+ea ++ +l+rg+l++++W+ev++++ + +r+ +qCk++++ l+k+yk +k++ + + +s +p+f +l+a PON96432.1 31 CWSEEATSTLVEAWGDRYLALKRGNLRQQHWQEVADAVnsdhgdGSVRSRRTDIQCKNRIDTLKKKYKIEKARVFESEGSYVSAWPFFARLDA 123 7************************************99988888889******************99998888899*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MDSDAETPSP VVARRTRTTP FSGGGGGRED CWSEEATSTL VEAWGDRYLA LKRGNLRQQH 60 WQEVADAVNS DHGDGSVRSR RTDIQCKNRI DTLKKKYKIE KARVFESEGS YVSAWPFFAR 120 LDALIGKKYP MSKVLSPPAV AGVNRNPSPP SWARYSPVPV GPRSATQKRP APSPATAPLG 180 GDYSGSQRNF SVFAAAAVAA LEEEEADNED TDRSGSRSST GSRRRNREGE PLYRGLAKAI 240 ERFGEIYERV EAAKQRQMVE LEKQRMQFAK DLEFQRMQLF METQVQLQKI KRAKRSSGNG 300 ESLVLFFPLF FAVGVLELFH CLVFGNGGNT IVFQLGHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	5e-77	Trihelix family protein