PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON96410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29098.2 Da PI: 8.8342 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.2 | 1.7e-14 | 80 | 126 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riN f++Lr+l+P a kK++Ka+ L +++ ++k+L PON96410.1 80 KNHSEAEKRRRARINAHFDTLRSLVPGA-----KKMDKASLLAEVISHLKDL 126 58*************************9.....9****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MEPFLWSSSG VSSSWFERRN DGLLANSSLR CGSASSSSLV LGSASSSSLV LDSVRGELVE 60 AHVKLERKGV SAERSMEALK NHSEAEKRRR ARINAHFDTL RSLVPGAKKM DKASLLAEVI 120 SHLKDLKRKA REASEDCVLP KDSDEVKVEP EDELEGRPYS IRVSLSCDYK PGLLSDLRHA 180 LDALHMIIVR AEIVTLGCRM KNVFVMTTCN EDKVEDNEIR RFHAKSICQA LRSVLNKFSA 240 SEELLGNTLS NKRRRVSIFN P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 112 | KRRRARINAHFDTLRSLVPGAKKMDK |
2 | 252 | 256 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 4e-28 | bHLH family protein |