PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96342.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 427aa    MW: 47553.1 Da    PI: 4.2766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-194695255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  PON96342.1 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
                789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MARKRKAASE GVEDKSSSEG TMAWDEIVKE AAAAAALGGA RRARKRFVGV RQRPSGRWVA  60
EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPCPPSSS SSPALPSKIT  120
NLLLQRLKAR NNSNISTTSV SSSSTLPINL PLKQQLVDHQ EELTDFSDAQ FSDFLNDPED  180
YTNISDSDMT GNISAATMDY MTSSFESCLT DQRKDCEEKE EEVLDYNLSD GSGQTSSGEY  240
GHSRGEVEEQ EEEEDDDDGE EQGSDYRDLS ALDFQFVDDA KSSPCYYSPF EIAGEIEEPI  300
MEEHAEAFSD EPSMLREAMK RMKYERKFSA SLYAFNGIPE CLKLKIGAAG NVNGRGRSDQ  360
LRNLKNACNK SKEEMEKEEH VEMTRKKEEE GPESSNESGS SSNDFSNDVE LMSLWSSLDL  420
PPICFVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-21ERF family protein