PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96335.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 511aa MW: 55157.9 Da PI: 8.059

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	109	2.3e-34	254	310	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg+nWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+g Hnhe PON96335.1 254 DDGFNWRKYGQKQVKGSEFPRSYYKCTHSNCPVKKKVERSP-DGQITEIIYKGMHNHE 310 8**************************************.*************8 PP
2	WRKY	107.3	7.8e-34	435	493	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++dpk+v++tYeg+Hnh+ PON96335.1 435 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHD 493 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MAKNEDPERV SFSGAAVPPP PPPSHPPSAA RPPLTLPPRP TMDSFFGGGA GASPGPLTLV 60 SRFFSDHNPD SDYRSFTQLL AGAIASPLAA SAARPGFNFD NPVDNYSKGG DGRDKDSGFK 120 QSRPMNLVVA NSPLSPLFMV PPGLSPSGLL NSPGFFSPPS PFGMSHQQAL AQVTAQAALA 180 QSHMPLQAEY KPSLVPASTE TQTLEPSFVK TEPSQQQAVP STSEPKGSAA EASGPSHSDR 240 KYQTPPPATD KPADDGFNWR KYGQKQVKGS EFPRSYYKCT HSNCPVKKKV ERSPDGQITE 300 IIYKGMHNHE MPQPGKRAKD GGGDMNGNAN FQPKSETNSQ NRTAGQLHRS NETVPSQLMH 360 KRDHESTQGA PVQVPGSSDS EEVVDEEVRE DEGDADEPNA KRRNIDAGAS EVSLSHKTVT 420 EPKIIVQTRS EVDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTSAGCNVRK HVERASTDPK 480 AVITTYEGKH NHDVPAARNS SHNTANNNAQ S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MAKNEDPERV SFSGAAVPPP PPPSHPPSAA RPPLTLPPRP TMDSFFGGGA GASPGPLTLV  60
SRFFSDHNPD SDYRSFTQLL AGAIASPLAA SAARPGFNFD NPVDNYSKGG DGRDKDSGFK  120
QSRPMNLVVA NSPLSPLFMV PPGLSPSGLL NSPGFFSPPS PFGMSHQQAL AQVTAQAALA  180
QSHMPLQAEY KPSLVPASTE TQTLEPSFVK TEPSQQQAVP STSEPKGSAA EASGPSHSDR  240
KYQTPPPATD KPADDGFNWR KYGQKQVKGS EFPRSYYKCT HSNCPVKKKV ERSPDGQITE  300
IIYKGMHNHE MPQPGKRAKD GGGDMNGNAN FQPKSETNSQ NRTAGQLHRS NETVPSQLMH  360
KRDHESTQGA PVQVPGSSDS EEVVDEEVRE DEGDADEPNA KRRNIDAGAS EVSLSHKTVT  420
EPKIIVQTRS EVDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTSAGCNVRK HVERASTDPK  480
AVITTYEGKH NHDVPAARNS SHNTANNNAQ S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-100	WRKY family protein