PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96221.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 1024aa MW: 112840 Da PI: 7.2591

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.9	4.7e-08	521	569	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lvd+v + G g+W+ I r Rt ++k++w+++l PON96221.1 521 AWTLVEVMKLVDGVSKCGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 569 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
METEVGVEKN DEGKCEESGC EKSSPSSSSP KYIADPVVYK LVRVEGDGRF VPATDDEVME 60 VEDFLVDDKT EMHGVADSGK TAECMSKDEG SAIVKLQLES SEGLSHSGNA EADAEKLTSD 120 LETASFYQHD KLPTIDEKHQ SEICMQEIVP SFAPIVGGNC KSLSGSAVEF SKPSDGQPET 180 GSSTSAVCNN GKPDFSKLKA EICLDNMSIR ELHELFKATF GRETTVKDKM WLKRRIAMGL 240 TNSCDVTATT FTIKDNKLVD KVKEESCKNE NDTFAEGSAA EAMNVSSKNS PTNCDSQMED 300 HEIVSGKRFS DSVGFDFGSE DLNAEQRAAK RVRKPTRRYI EELSEAESRD CSPKVHSSAK 360 NIGLGWTSPK SCPRPVKNVS FNERIMLTRL DSLGGSGVQI PCVSRVRRSR PRKNIKALMR 420 FHPSSVGMEA EVVKKALAVP SSQPDSELID KVSEFRSPSE QSEPLLTSEA EKDEQCAAMG 480 TVQLGKNLDP KQTDSYDDTS DDNIATVPTA KGGMRRKHHR AWTLVEVMKL VDGVSKCGAG 540 RWSEIKRLAF ASYSYRTSVD LKDKWRNLLK ASITQTPPDE GMNSRKHAAV PIPAPILLRV 600 RQLAEMHSQV PPNLGSNSLA GVGGRRRNQA GLRSPIHDSQ LQGSDHRFGT ATQPSLEYHL 660 GQLKAKIAKL RTQLLEPPKG SSGGGEGFEV TKFGHGRVAL IGFPSVGKST LLTMLTGTQS 720 EAASYEFTTL TCIPGIIHYN DTKIQLLDLP GIIEGASEGK GRGRQVIAVA KSSDIVLMVL 780 DASKSEGHRQ ILTKELEAVG LRLNKRPPQI YFKKKKTGGI SFNSTLPLTH VDEKLCYQIL 840 HEYKIHNAEV LFREDATVDD LIDVIEGNRK YMKCVYVYNK IDVIGIDDVD KLARQPSSLN 900 LDRLLAKMWE EMGLVRVYTK PQGQQPDFSD PVVLSNDRGG CTVEDFCNHI HRSLVKDVKY 960 VLVWGISARH YPQHCGLGHN LHDEDVVQIV KKKEKEEGGR GRFKSHSTAP ARISDREKKA 1020 PLKT

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

METEVGVEKN DEGKCEESGC EKSSPSSSSP KYIADPVVYK LVRVEGDGRF VPATDDEVME  60
VEDFLVDDKT EMHGVADSGK TAECMSKDEG SAIVKLQLES SEGLSHSGNA EADAEKLTSD  120
LETASFYQHD KLPTIDEKHQ SEICMQEIVP SFAPIVGGNC KSLSGSAVEF SKPSDGQPET  180
GSSTSAVCNN GKPDFSKLKA EICLDNMSIR ELHELFKATF GRETTVKDKM WLKRRIAMGL  240
TNSCDVTATT FTIKDNKLVD KVKEESCKNE NDTFAEGSAA EAMNVSSKNS PTNCDSQMED  300
HEIVSGKRFS DSVGFDFGSE DLNAEQRAAK RVRKPTRRYI EELSEAESRD CSPKVHSSAK  360
NIGLGWTSPK SCPRPVKNVS FNERIMLTRL DSLGGSGVQI PCVSRVRRSR PRKNIKALMR  420
FHPSSVGMEA EVVKKALAVP SSQPDSELID KVSEFRSPSE QSEPLLTSEA EKDEQCAAMG  480
TVQLGKNLDP KQTDSYDDTS DDNIATVPTA KGGMRRKHHR AWTLVEVMKL VDGVSKCGAG  540
RWSEIKRLAF ASYSYRTSVD LKDKWRNLLK ASITQTPPDE GMNSRKHAAV PIPAPILLRV  600
RQLAEMHSQV PPNLGSNSLA GVGGRRRNQA GLRSPIHDSQ LQGSDHRFGT ATQPSLEYHL  660
GQLKAKIAKL RTQLLEPPKG SSGGGEGFEV TKFGHGRVAL IGFPSVGKST LLTMLTGTQS  720
EAASYEFTTL TCIPGIIHYN DTKIQLLDLP GIIEGASEGK GRGRQVIAVA KSSDIVLMVL  780
DASKSEGHRQ ILTKELEAVG LRLNKRPPQI YFKKKKTGGI SFNSTLPLTH VDEKLCYQIL  840
HEYKIHNAEV LFREDATVDD LIDVIEGNRK YMKCVYVYNK IDVIGIDDVD KLARQPSSLN  900
LDRLLAKMWE EMGLVRVYTK PQGQQPDFSD PVVLSNDRGG CTVEDFCNHI HRSLVKDVKY  960
VLVWGISARH YPQHCGLGHN LHDEDVVQIV KKKEKEEGGR GRFKSHSTAP ARISDREKKA  1020
PLKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	407	413	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-113	MYB_related family protein