PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96122.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Dof
Protein Properties Length: 220aa    MW: 23963.4 Da    PI: 8.7954
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.51.9e-401676262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++++lkcprC+s+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s
  PON96122.1 16 EQETLKCPRCESMNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRS 76
                57899****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MQDPATFQPI KTHFPEQETL KCPRCESMNT KFCYYNNYNL SQPRHFCKNC RRYWTKGGAL  60
RNIPVGGGSR KNTKRSSNPK RASSSASSPS LSSSSTQNPD PLPEPTRVYG SPVDQDRQML  120
DIPGSFSSLL TSNGQFGGLM EGLNARGSGV KMGQLSELRR EGVNSGHEMN SDSGRSLGME  180
VQSSSNSEGY LSLQNGDSNC WGGGNGWPDL AIYTPGSSFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21270.15e-43Dof family protein