PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON95932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | LBD | ||||||||
Protein Properties | Length: 244aa MW: 26642.3 Da PI: 7.9577 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 91.9 | 7.6e-29 | 4 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C++dC+++p++ p++q++++ +++k++G++ +l+l++a p+ r+++++sl+yeA+ r+ +P++G+vg+++++++ +q+++e+ PON95932.1 4 SCNGCRVLRKGCSDDCAIRPCLqwiksPDSQAQATLFLAKFYGRTGLLNLINAGPRYLRPAVFKSLLYEACGRIVNPINGSVGLLWTGEWAKCQAAVEA 102 6*************************************************************************************************9 PP DUF260 95 allkee 100 +l++++ PON95932.1 103 VLAGAP 108 998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MRTSCNGCRV LRKGCSDDCA IRPCLQWIKS PDSQAQATLF LAKFYGRTGL LNLINAGPRY 60 LRPAVFKSLL YEACGRIVNP INGSVGLLWT GEWAKCQAAV EAVLAGAPIK VESDEHAPHS 120 KLPIKSSCVD IRHVTKDDVV PNSDPSHHRQ LRTRNRFKRT AAGHKTLLCG SDMGSLTQFL 180 NPDHEYWWPS LLGNGSSTSA GEDLESMFSV ESVEASLAQQ AKPEPSPADD TRGEVRLELT 240 LGLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68510.1 | 1e-69 | LBD family protein |