PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95923.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 330aa    MW: 36030.1 Da    PI: 4.5123
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19121170154
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                 s y+GVr++k +g+W+AeIrd +     + +r +lg++ t+eeA ka++a r+++e
  PON95923.1 121 SPYRGVRQRK-WGKWAAEIRDpF-----KgARLWLGTYNTPEEASKAYEAKRLEFE 170
                 68*******9.**********55.....45***********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MPEPRKQSLN SSVKSSKGAI SMAESKPMRK IRVICSDPYA TDSSSSEDEG EESFNRRASK  60
KSKRIVREIH VPLFPKPSLK ISESESSVQD SNYGVGSGKT LNSKKRVLAK TSPGIKKPSS  120
SPYRGVRQRK WGKWAAEIRD PFKGARLWLG TYNTPEEASK AYEAKRLEFE TMAAMAPSSE  180
KSNNTSSSAV VPVSPEDSES VLSHNSPSSV LELDTSASNS NLNGLAADLT KEIVDSNPSE  240
LEKPDLGFID EALASFPPFE QDLCLEPGQL DSLFLDDIGQ LLDGFSSIDD VQIFGLDDNE  300
SSELPDCDFG DFGKDDIACW MDEALNIPCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-36ERF family protein