PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95852.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 301aa    MW: 33031.6 Da    PI: 5.8035
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-30109167259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ +tY+ eHnh+
  PON95852.1 109 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLLVTYSAEHNHP 167
                 69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDITGLITRI HTKNNPFLGD PDRDSNIIND YSTTTTTTCT TPRENGSESP PPSSFHDSKN  60
ITTSTTTTSA MLSSPKKSRR AVQKRVVSIP IKEVEGSRLK GESTSTPPSD SWAWRKYGQK  120
PIKGSPYPRG YYRCSSSKGC PARKQVERSR VDPTMLLVTY SAEHNHPWPA SRNHHHHNHN  180
QSAAAAALKI VKDEAPDAQP DRDMEPEPEP EPEPLERFAG LGGDDALVVG DEFGWFGDMD  240
ATSSSPVLES PIFSESGPGE AAAVFPMMRE EDESLFADLG ELPECSLVFR HRGVGPQVQI  300
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-78WRKY family protein