PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95687.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 356aa    MW: 39609.2 Da    PI: 7.5679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.1e-09180227455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +     +K   Ka +L + ++Y++sLq
  PON95687.1 180 SHSLAERVRREKISERMKMLQKLVPGC-----EKvTGKALMLDEIINYVQSLQ 227
                 8*************************9.....67699***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MASFSYPHHP VLLDSVFLSN NTPIFKISGL VDQEENNNNN NSINTNGFSQ LYPSDQTVHG  60
VHESSCLDHS SKVALSDNEP SVTKKQSTES SAVVDKLESG EQVTQKVTPM EKKRKNKNGR  120
FSNSAQSKDA RGKKQRNCGD SMAKEEKKVK SNKNDQKKAQ EEPPTGYIHV RARRGQATDS  180
HSLAERVRRE KISERMKMLQ KLVPGCEKVT GKALMLDEII NYVQSLQNQV EFLSMKLASL  240
NPLFYDFGMD LDAFMVRPEG LNLNALASQI PSVPPCSQSQ PTAFTTDNTT GAATNFPITA  300
NNNYPLLDNS GSLLLQQGQR PSTVFSHDNG TLLWDMEDQR QNFLNPSDFS NLCSFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112150KKRKNKNGRFSNSAQSKDARGKKQRNCGDSMAKEEKKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-57bHLH family protein