PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95557.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 350aa    MW: 37375.6 Da    PI: 8.577
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95557.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.1e-11284329655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  PON95557.1 284 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 329
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MYPSTSSSSS QKPTGPLPTG LTRYGSAPGS LLATAVDSVI GAEREFNALR SPPPPPPPLV  60
GQYFSGDSSS ITSESNCKVN SSLHRSSHGL NEIAARIGSS SSSSSSSASP SSSLLRQRSS  120
PAGFLSHLSN VVTDKNGFSV TRGNGGYGSQ GGTNSGHGVS RLTSQLSFTR QDCLSQISEV  180
SENGIDDLSP ENVRHSATHS FATSFGMDGW DNNTNSIVFS APPSKRAKNM DGDMFNCLNA  240
LESQFSLPQT TLEMAAVEKL LHIPEDSVPC KIRAKRGCAT HPRSIAERER RTRISGKLKK  300
LQDLVPNMDK QTSYADMLDL AVQHIKGLQN QVQKLHKDLE NCTCGCKQNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-87bHLH family protein