PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95419.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 704aa    MW: 77823.3 Da    PI: 6.1383
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS441.84.9e-1353387031374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar...svselykalppsetseknsseelaalklfsevsPilkfshl 96 
                 lv+lLl+cAeav+++d  la+++L +l+  ++p gd+mqR+a++fteAL arla    + s++ +a +p +  + ns+e+l+++++ ++++P++kf+h+
  PON95419.1 338 LVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALTARLAAtltTNSTIGSASKPFSPFPPNSVEVLKIYQIVYQACPYVKFAHF 436
                 68***************************************************99332234455555555555677*********************** PP

        GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 taNqaI ea+e eervH+iD+di qG QWpa++qaL++Rp+g+p lRiTgvg+    s ++++etg+ L+++A++l+vpfef++ v ++ledl++++++
  PON95419.1 437 TANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALSARPGGAPFLRITGVGP----SIDSVHETGRCLTELAHSLQVPFEFHA-VGEQLEDLKPHMFH 530
                 *****************************************************....9**************************.7************* PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  + gEalaVn+v +lhr++       ++  ++L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+es +r+kvE+ ++++ei
  PON95419.1 531 RRVGEALAVNSVNRLHRVP------VNCLGNLLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPAESAQRAKVEQYIFAPEI 623
                 ******************9......344557******************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +n+vaceg er+erhe+l kWr+ +e  GFk vpls +a++q k ll  ++ dgyr+ e++g+l+lgW+drpL+++SaWr
  PON95419.1 624 RNIVACEGPERTERHERLDKWRKLMEGKGFKGVPLSANAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRPLIAASAWR 703
                 *******************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MGTLKRETSC TKLQRTSPND QSVQSSSVSE CKNIKATPQS SDMEQSSLTP PSLDFPTLKF  60
ELENDVEVQS PDNSMWDSLF SDHFESPDFM IMSPVRNMPS PQLASAYNHN YNYAHAMQGQ  120
SLSGCSPPRS SSPLGAFSSS SSHKGKGLSP LHKVFNSVNN HYMQQQQSDF NLALPAIEEL  180
LEDYINPKDE FGKSYTTTTA TTPLTKMSDI VDGSSSSSQS NFDIPNSTSV VTPPPFLDCP  240
TVTNSSSFCG SACEGSSASG GNSCHHHQPT TQETDNTNTA YQMGSIPFTT SLSQQLQQEQ  300
QQEKKQQHQQ LHQTLGHSLM LHHPPIASDQ EQDSGLQLVH LLLACAEAVA KEDYMLARRY  360
LHHLNRVVTP LGDSMQRVAS CFTEALTARL AATLTTNSTI GSASKPFSPF PPNSVEVLKI  420
YQIVYQACPY VKFAHFTANQ AIFEAFEAEE RVHVIDLDIL QGYQWPAFMQ ALSARPGGAP  480
FLRITGVGPS IDSVHETGRC LTELAHSLQV PFEFHAVGEQ LEDLKPHMFH RRVGEALAVN  540
SVNRLHRVPV NCLGNLLAMI RDQAPNIVTL VEQEASHNGP YFLGRFLEAL HYYSAIFDSL  600
DATFPAESAQ RAKVEQYIFA PEIRNIVACE GPERTERHER LDKWRKLMEG KGFKGVPLSA  660
NAVTQSKILL GLYSCDGYRL TEDKGCLLLG WQDRPLIAAS AWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-101GRAS family protein