PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95116.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 327aa    MW: 37042.9 Da    PI: 4.7823
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.24.5e-101712112259
                 EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Y+rCt++   gC ++k+v++ +e+p +  +tY g+H+++
  PON95116.1 171 KNYFRCTHKydqGCLATKQVQKMEEEPPMYRTTYYGDHTCR 211
                 68******99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MKPSLYYIEM GFDPSAQENA SSGRRNVIDE LVQGRELANQ LQSLLAKSSQ NDMSSAEDLV  60
SKIMESFTNT LFMLNNRKPN YEAEAEAAAH DDDETFDVVS QVQPASTTSP VDSPCLDGRK  120
SEDSQESCRS TSVISTTSLK DRRGSYKRRK TSHTWKRESP TLIDDGFAWR KNYFRCTHKY  180
DQGCLATKQV QKMEEEPPMY RTTYYGDHTC RNLLKAPELV LDCTSPTQDS SILLSFNDAN  240
LNLASKQASH PFFSSFQSVK QEFKDDNPII TSHNYQTSSS DYIVSPDHHL TALIDRSPLE  300
SDHIHGDAIS EMIMDSFEDD VLQHLEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-34WRKY family protein