PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95015.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 299aa    MW: 31521.5 Da    PI: 6.4068
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.7e-10149193554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  PON95015.1 149 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 193
                 99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MANNPSEAPA DDFLEQILGF STFASADSNL SGTDGGLAGP HGGPMMLQLS SGDGSGHIPA  60
VGGGGGGGFH GSVFPLGLSL EQGKAGFLKP EEASGSGKRF RDDVVDGRAS TLKNVFHGQP  120
IPATVATAPH PPAMRPRVRA RRGQATDPHS IAERLRRERI AERIRALQEL VPSVNKTDRA  180
AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA VAPLVTDIPL SSVEEEGSEG GRNQPAWEKW  240
SNDGTERQVA KLMEENVGSA MQFLQSKALC IMPISLASAI YHSQPPDTSS VKPEANPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.24e-98bHLH family protein