PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95010.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bZIP

Protein Properties

Length: 452aa MW: 48826.1 Da PI: 6.3511

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.4	9.8e-16	230	285	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L e ++L k+l+ ++ ++++ PON95010.1 230 DAKRARRMLSNRESARRSRRRKQAQMSELETQVGQLRVEHSTLLKRLSDMNHKYDN 285 68******************************************999988887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MNSVFSVDEI SDPYWSSSPA MNRSASEWAL ERFLEEFSTP TTSTASHRPT LPATTAVASP 60 SVASQSSTSK FPEGDDEVVE IKKPDNQRHH HRYPPSSDSS SAVPMLPLDS DQYREFLKNQ 120 LDLACAAVAL TRESLGVKPG DSANFSESQL QASMPSQLGS GAHDEGIGHG VSMARTDADE 180 GPLGIPALPP IQKKMVTQSR QTTSGSSKED SDDDDLDGDM ENTDNMDPSD AKRARRMLSN 240 RESARRSRRR KQAQMSELET QVGQLRVEHS TLLKRLSDMN HKYDNAAVDN RILKADIETL 300 RAKVKMAEET VKRVTGINPL LLAVSNAGLA SVNNLMDAST NAAVPVQRNP NHIFHQAVPG 360 ITGPIPNHQR LDGGGFHGST SISLVGNPRN DVAQQSDVCG NKLPDTSSIQ HSARVANLQK 420 QLTAGTNAGE ALPGWGPEVP HAVAKNNKQN HI

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MNSVFSVDEI SDPYWSSSPA MNRSASEWAL ERFLEEFSTP TTSTASHRPT LPATTAVASP  60
SVASQSSTSK FPEGDDEVVE IKKPDNQRHH HRYPPSSDSS SAVPMLPLDS DQYREFLKNQ  120
LDLACAAVAL TRESLGVKPG DSANFSESQL QASMPSQLGS GAHDEGIGHG VSMARTDADE  180
GPLGIPALPP IQKKMVTQSR QTTSGSSKED SDDDDLDGDM ENTDNMDPSD AKRARRMLSN  240
RESARRSRRR KQAQMSELET QVGQLRVEHS TLLKRLSDMN HKYDNAAVDN RILKADIETL  300
RAKVKMAEET VKRVTGINPL LLAVSNAGLA SVNNLMDAST NAAVPVQRNP NHIFHQAVPG  360
ITGPIPNHQR LDGGGFHGST SISLVGNPRN DVAQQSDVCG NKLPDTSSIQ HSARVANLQK  420
QLTAGTNAGE ALPGWGPEVP HAVAKNNKQN HI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	252	RRSRRRKQ
2	247	252	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54620.1	5e-60	bZIP family protein