PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94974.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 358aa MW: 41169.2 Da PI: 4.8128

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.6	1.5e-36	47	137	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws++g+sfvv+d+++fa ++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++ik PON94974.1 47 FLTKTYDMVDDPTTNRIVSWSRDGTSFVVWDPHSFAMNLLPRYFKHNNFSSFVRQLNTYGFRKIDADT---------WEFANEGFIRGQKHLLRNIK 134 9*************************************************************9998.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r++ PON94974.1 135 RRR 137 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MNFLYPVKEE YPSGSSSSQY AGGDSRTPLM PPPQPMEGLH DVGPPPFLTK TYDMVDDPTT 60 NRIVSWSRDG TSFVVWDPHS FAMNLLPRYF KHNNFSSFVR QLNTYGFRKI DADTWEFANE 120 GFIRGQKHLL RNIKRRRAPS QPFLQEQQAL GPCVELGRFG LDGEIDRLRR DKQVLMMELV 180 KLRQQQQNTK AYLQAMEQRL QGTEMKQQQM MAFLARAMQN PSFLQQLVQQ KERRKALEEA 240 MTKKRRRPID QGPSSSSRSS EPQMSQNPIK MEPLEVSDYG FEVSELEALA LEMQGFGKQR 300 MEQEDGEDDE LEAPESGDRE LDDGFWEELF SEGAKGGEDE EDVNVLADRF GYLGSSPR

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MNFLYPVKEE YPSGSSSSQY AGGDSRTPLM PPPQPMEGLH DVGPPPFLTK TYDMVDDPTT  60
NRIVSWSRDG TSFVVWDPHS FAMNLLPRYF KHNNFSSFVR QLNTYGFRKI DADTWEFANE  120
GFIRGQKHLL RNIKRRRAPS QPFLQEQQAL GPCVELGRFG LDGEIDRLRR DKQVLMMELV  180
KLRQQQQNTK AYLQAMEQRL QGTEMKQQQM MAFLARAMQN PSFLQQLVQQ KERRKALEEA  240
MTKKRRRPID QGPSSSSRSS EPQMSQNPIK MEPLEVSDYG FEVSELEALA LEMQGFGKQR  300
MEQEDGEDDE LEAPESGDRE LDDGFWEELF SEGAKGGEDE EDVNVLADRF GYLGSSPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	247	RRKALEEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-126	HSF family protein