PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94656.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Trihelix
Protein Properties Length: 280aa    MW: 33438.6 Da    PI: 7.3053
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.54.9e-2524105186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W ++e+++Li++r+e+e++++  k+ k+lW++v++ m ergf r+p qCk+kw+nl +ryk  ++++ +    +s++cp+fd+l+
  PON94656.1  24 QWGQEETKELIRIRTELERDSSVVKRSKALWDAVGSMMLERGFIRTPDQCKCKWKNLLNRYKGKETSDPE----NSRQCPFFDELH 105
                 7**************************************************************9999997....5899******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MYGWGDDEKE RIRAMVMAPS AQGQWGQEET KELIRIRTEL ERDSSVVKRS KALWDAVGSM  60
MLERGFIRTP DQCKCKWKNL LNRYKGKETS DPENSRQCPF FDELHALFTE RQNNMQRLLL  120
ESEIGSPRSR KKMKKSSTSD DLSENEENDQ DETDEETPTR SKHRKRKTQK IALDKSSKAA  180
STACANSETD IQVMLKQFFQ QQQRMEKQWM EMMERRAYEQ QLFEQEWRQS MEKLERERLL  240
IEQAWREREE QRRIREESRA ERRDALLTTL LNSLLGENNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-26Trihelix family protein