PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94363.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 556aa MW: 62416.5 Da PI: 7.2521

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105	4e-33	213	270	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct ++Cp+kkkvers d++++ei+Y+g+Hnh+k PON94363.1 213 EDGYNWRKYGQKSVKGSENPRSYYKCTNPNCPMKKKVERSL-DGQITEIVYKGTHNHPK 270 7**************************************.*************85 PP
2	WRKY	106.5	1.4e-33	381	439	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+++d ++v++tYeg+Hnh+ PON94363.1 381 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHDMRAVITTYEGKHNHD 439 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MTFSFTDLLA NNNINMDNNN ISQENTSLNW GFSDQNEIDI PRFKTLQPSS LPLSSPTPFS 60 PSSYLANSSS MFSPTEFLNS PMFLSGSNAL PSPTTGAFAG QTFDWRSNSK DKQQQMEEEE 120 KFFADFSFQP QTGSVSMEKP MERPQQQQQQ KQAWEFDFNK PTKQSSFPLE KVEVKSELSS 180 NQSFSSEMAK TQMTIPQTHY AQPSQYVREQ KSEDGYNWRK YGQKSVKGSE NPRSYYKCTN 240 PNCPMKKKVE RSLDGQITEI VYKGTHNHPK PQSTRRTSSS HSITHQNPSY TNSGGVSDHS 300 GQTFSNAVHE DYSSDSIGEE AFDRNSPTFN SVGDVGDNDE NEPEAKRWKG ENENEVFSAS 360 GNRTVKEPRV VVQTTSEIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCPVRKHVER 420 ASHDMRAVIT TYEGKHNHDV PAARGSSSYA MNRPAPNNTS NGVVTMPHRP LPLVNHSNHS 480 NYSSSVLSTR LPNSVVTQQP HTLQMLQGSG SLGLSGFGKP AGMYVPRSEP EGVFFKAKEE 540 RNKEQKDDTF FDSFLA

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MTFSFTDLLA NNNINMDNNN ISQENTSLNW GFSDQNEIDI PRFKTLQPSS LPLSSPTPFS  60
PSSYLANSSS MFSPTEFLNS PMFLSGSNAL PSPTTGAFAG QTFDWRSNSK DKQQQMEEEE  120
KFFADFSFQP QTGSVSMEKP MERPQQQQQQ KQAWEFDFNK PTKQSSFPLE KVEVKSELSS  180
NQSFSSEMAK TQMTIPQTHY AQPSQYVREQ KSEDGYNWRK YGQKSVKGSE NPRSYYKCTN  240
PNCPMKKKVE RSLDGQITEI VYKGTHNHPK PQSTRRTSSS HSITHQNPSY TNSGGVSDHS  300
GQTFSNAVHE DYSSDSIGEE AFDRNSPTFN SVGDVGDNDE NEPEAKRWKG ENENEVFSAS  360
GNRTVKEPRV VVQTTSEIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCPVRKHVER  420
ASHDMRAVIT TYEGKHNHDV PAARGSSSYA MNRPAPNNTS NGVVTMPHRP LPLVNHSNHS  480
NYSSSVLSTR LPNSVVTQQP HTLQMLQGSG SLGLSGFGKP AGMYVPRSEP EGVFFKAKEE  540
RNKEQKDDTF FDSFLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-105	WRKY family protein