PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94246.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 352aa MW: 38007.9 Da PI: 9.5797

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.6e-31	280	337	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYeg+Hnh+ PON94246.1 280 DEFSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPAMLIVTYEGDHNHS 337 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAVELMMGYG IDSSFSSDNM EENSVKEAAS AGIQSVEKFL RLISHHSHDH DHQEVADLAV 60 NKFKKVISLL DRGRTGHARF RRAPMAPLSS SSSPPPPVMQ DTPGQDPPGP SAPEPNLHPK 120 PEQGSAFKVY CPTPLLRLPP LPQNQNQVVQ CRQSHGGALV PRNGSLEKKD ATTTTINFSA 180 SPSISAANSF MSSLTGDTDN SVPPSLSSGF QLTNLSQSSS GKPPLSSSSF KRKCSSVDDA 240 ALRCGSSSGR CHCSKKRKSK VKRVVRVPAI SMKMADIPPD EFSWRKYGQK PIKGSPHPRG 300 YYKCSSLRGC PARKHVERAL DDPAMLIVTY EGDHNHSHSV TEATAALVLE SS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAVELMMGYG IDSSFSSDNM EENSVKEAAS AGIQSVEKFL RLISHHSHDH DHQEVADLAV  60
NKFKKVISLL DRGRTGHARF RRAPMAPLSS SSSPPPPVMQ DTPGQDPPGP SAPEPNLHPK  120
PEQGSAFKVY CPTPLLRLPP LPQNQNQVVQ CRQSHGGALV PRNGSLEKKD ATTTTINFSA  180
SPSISAANSF MSSLTGDTDN SVPPSLSSGF QLTNLSQSSS GKPPLSSSSF KRKCSSVDDA  240
ALRCGSSSGR CHCSKKRKSK VKRVVRVPAI SMKMADIPPD EFSWRKYGQK PIKGSPHPRG  300
YYKCSSLRGC PARKHVERAL DDPAMLIVTY EGDHNHSHSV TEATAALVLE SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	1e-73	WRKY family protein