PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94205.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 276aa    MW: 30786.8 Da    PI: 9.0979
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.6e-08160200954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PON94205.1 160 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 200
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDHIDHHDHH LKSDDHDQMD MMMMMQMAAK LPDFSSGSAY SDVVHEDFSA VSATSSGGGH  60
LSFFSNYNTE TPPPPPPPHP HSAPSPPFMM NLPSTISFAT RNSCHNNCTL QNKRNNSMAA  120
MREMIFRMAV MQPVHIDPES VKPPKRRNVK ISKDPQSVAA RHRRERISEK IRILQRLVPG  180
GTKMDTASML DEAIHYVKFL KTQLQSLERA AAHNNSNNNR PTTAGIGFPV AMSTGTYNSQ  240
LPNINVNSNM DKAAYQILPP PHHQNAVHHF GDARQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.17e-48bHLH family protein