PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94107.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 575aa MW: 62297.7 Da PI: 6.56

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.3	1.1e-31	223	280	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k PON94107.1 223 DDGYNWRKYGQKHVKGSEFPRSYYKCTYPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 280 8**************************************.*************85 PP
2	WRKY	106.2	1.6e-33	395	453	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ PON94107.1 395 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 453 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MEAATAADLH IRSSEDVDPG RAEFPDPPSG CGGAKYKLLS PAKLPISRSA CLTIPPGLSP 60 SSFLESPVLL SNMKAEPSPT TGTFMKSLMT QGSVGSATYS TTTLCSNINI SDYKNSSSFE 120 FKPHATSNMV TTDPNYQRTA QSVQVQGQPQ SFAPVSLVKT EMAVNSNELS LSAAHGVVAS 180 GTNASASADG DSDELNQNGN PNSGVQTAQF DLKGSGPSVI SSDDGYNWRK YGQKHVKGSE 240 FPRSYYKCTY PNCEVKKLFE RSHDGQITEI IYKGTHDHPK PQPSRRYNTG TMMSTQEERS 300 DKFSPITGRD DKSSSMYGQA SNTNEANGTP DLSPISANDD SVEATGNRIH DDVDDDDPFS 360 KRRKLEIGGI DVTPVVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK 420 CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPTARNS SHEMVGSMAA SVPARIRSEE 480 TDTISLDLGV GISSAAENRS NEHLPTSHSQ LVESQTHNSN VNVVPVPSFY GILGNGLNQF 540 GSRENLGEGR SIEISSLNHS TYPYPQNMGR ILTGP

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MEAATAADLH IRSSEDVDPG RAEFPDPPSG CGGAKYKLLS PAKLPISRSA CLTIPPGLSP  60
SSFLESPVLL SNMKAEPSPT TGTFMKSLMT QGSVGSATYS TTTLCSNINI SDYKNSSSFE  120
FKPHATSNMV TTDPNYQRTA QSVQVQGQPQ SFAPVSLVKT EMAVNSNELS LSAAHGVVAS  180
GTNASASADG DSDELNQNGN PNSGVQTAQF DLKGSGPSVI SSDDGYNWRK YGQKHVKGSE  240
FPRSYYKCTY PNCEVKKLFE RSHDGQITEI IYKGTHDHPK PQPSRRYNTG TMMSTQEERS  300
DKFSPITGRD DKSSSMYGQA SNTNEANGTP DLSPISANDD SVEATGNRIH DDVDDDDPFS  360
KRRKLEIGGI DVTPVVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK  420
CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPTARNS SHEMVGSMAA SVPARIRSEE  480
TDTISLDLGV GISSAAENRS NEHLPTSHSQ LVESQTHNSN VNVVPVPSFY GILGNGLNQF  540
GSRENLGEGR SIEISSLNHS TYPYPQNMGR ILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein