PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93669.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 699aa MW: 77226.3 Da PI: 9.467

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93669.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.4	6.8e-13	12	64	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 W t+E++ll++av+++G+++W+++a+++ + +t+ +ck+++++++ PON93669.1 12 TWGTWEELLLACAVHRYGTDSWDSVASELRkrtstphLLLTPHSCKHKYHDLK 64 6**********************************99********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MAKPNFPEKQ TTWGTWEELL LACAVHRYGT DSWDSVASEL RKRTSTPHLL LTPHSCKHKY 60 HDLKRRFARN DVVSAPSDEN DDGAAIAASI PFLDELRRLR VAELRREVER YDLSIVSLET 120 KVEKLKEERE QSLKGPEKPD LEKESKDDDE EEEEETVRSE GASPENMAEK AVSGEGSVYD 180 ESNSTNLKGE APPGPEPATS PPTPAEPASA AAGEPDRVRE YGKLAVEDSY NGSSETIAKE 240 SAAVSPVQES EKVESEKNGG GDSAESKEED EGTKEVCSSE MQSSTSLSRK KKVEESDEPE 300 DQSVDTKRAP IESQSFIDIL EILRSHKSGS FFERRPELQE TPKYINTIRQ HMDFDMVRNR 360 LEEGWYSGCK SKFFRDLLLI FNNAIVFFGR KSPESKAATE LRHLLLKEMA LKTTTKRDSL 420 PKDETQALPS KKEPEEQEQP SEMLLRKPKL SVPMNACRKR SSITARASTS SSGAERKKEQ 480 TNALLDVKSA MSWKQSDKSS SDKADEFSGT KKKRKERFRT GTRNSSNKNG ASRSSTEINK 540 NSCSNTNVGT SSRGASNENS PSKATDKEKN NSSSTASGKK RSATNFLNRM KRSSSSNNGS 600 LLETLKDSDN SSRGGAEQKK NGAGKGGNSS SRQKEQASRR TSGSKQAKEP ESPAKRSVGR 660 PSKRTASVAA AAVVPAKRSR QSVENEALAP RNPKKRSRK

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MAKPNFPEKQ TTWGTWEELL LACAVHRYGT DSWDSVASEL RKRTSTPHLL LTPHSCKHKY  60
HDLKRRFARN DVVSAPSDEN DDGAAIAASI PFLDELRRLR VAELRREVER YDLSIVSLET  120
KVEKLKEERE QSLKGPEKPD LEKESKDDDE EEEEETVRSE GASPENMAEK AVSGEGSVYD  180
ESNSTNLKGE APPGPEPATS PPTPAEPASA AAGEPDRVRE YGKLAVEDSY NGSSETIAKE  240
SAAVSPVQES EKVESEKNGG GDSAESKEED EGTKEVCSSE MQSSTSLSRK KKVEESDEPE  300
DQSVDTKRAP IESQSFIDIL EILRSHKSGS FFERRPELQE TPKYINTIRQ HMDFDMVRNR  360
LEEGWYSGCK SKFFRDLLLI FNNAIVFFGR KSPESKAATE LRHLLLKEMA LKTTTKRDSL  420
PKDETQALPS KKEPEEQEQP SEMLLRKPKL SVPMNACRKR SSITARASTS SSGAERKKEQ  480
TNALLDVKSA MSWKQSDKSS SDKADEFSGT KKKRKERFRT GTRNSSNKNG ASRSSTEINK  540
NSCSNTNVGT SSRGASNENS PSKATDKEKN NSSSTASGKK RSATNFLNRM KRSSSSNNGS  600
LLETLKDSDN SSRGGAEQKK NGAGKGGNSS SRQKEQASRR TSGSKQAKEP ESPAKRSVGR  660
PSKRTASVAA AAVVPAKRSR QSVENEALAP RNPKKRSRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	2e-49	MYB_related family protein